Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MTND2P33-201ENST00000506452 1031 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC113430.1-201ENST00000506872 718 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 RNU6-678P-201ENST00000516832 109 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 MTND4LP18-201ENST00000526864 291 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 MIR7853-201ENST00000584820 132 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC103881.1-201ENST00000603476 538 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AL031775.1-201ENST00000607014 887 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AL391497.1-201ENST00000608671 547 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 FAM27B-201ENST00000610601 213 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC138749.5-201ENST00000611461 208 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AF001550.2-201ENST00000636643 217 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AL121657.1-201ENST00000327215 531 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 RNA5SP447-201ENST00000363749 119 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 SNORA75-201ENST00000384158 137 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 ATP5F1P4-201ENST00000397288 746 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 RPS27AP11-201ENST00000402798 447 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AL512430.2-201ENST00000406786 339 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 RPL7P8-201ENST00000411964 730 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AL590806.1-201ENST00000415818 853 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 CDC27P1-201ENST00000445384 715 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC004980.3-201ENST00000447046 365 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 MTAPP1-201ENST00000489154 819 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 DUXAP2-201ENST00000519198 589 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 CBX3P7-201ENST00000532876 502 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC016957.1-201ENST00000534895 309 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC008507.1-201ENST00000587506 734 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 RPL12P25-202ENST00000598100 674 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC103792.1-201ENST00000603591 919 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 MTCYBP22-201ENST00000603788 447 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC128687.1-201ENST00000605304 619 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC126118.1-201ENST00000607744 628 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC131235.4-201ENST00000609288 620 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC010632.3-201ENST00000611377 369 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 Z99129.1-201ENST00000612510 255 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC025594.3-201ENST00000613068 790 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 STMN1P1-201ENST00000617809 440 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 MIR6839-201ENST00000620425 113 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC244258.1-201ENST00000637553 1071 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AP005432.1-201ENST00000580891 3485 ntBASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
SLC44A3Q8N4M1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 Z95331.1-201ENST00000623075 23112 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 AC108751.5-201ENST00000492880 1336 ntBASIC5.04□□□□□ -1.6
SLC44A3Q8N4M1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms