Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MIR486-1-201ENST00000612171 68 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AC009032.1-201ENST00000617574 431 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 AC119674.1-220ENST00000641502 1048 ntBASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC65Q8IXS2 OTUD4P1-201ENST00000237841 3067 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 MIR423-201ENST00000362201 94 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 RNA5SP322-201ENST00000363617 119 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 RNU6-225P-201ENST00000384613 103 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 RNU6-328P-201ENST00000390887 106 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AL365396.1-201ENST00000430854 671 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 MRPS33P4-201ENST00000434892 317 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AF228730.2-201ENST00000438784 848 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 DNAJC19P1-201ENST00000455312 319 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 RNU6-1218P-201ENST00000458990 108 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 RPL7L1P8-201ENST00000469911 741 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 TRBV12-2-201ENST00000489763 344 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 HAUS1P1-201ENST00000505275 832 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AC021146.7-201ENST00000509604 775 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 OR8R1P-201ENST00000543943 764 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 PSMA6P4-201ENST00000603247 718 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 MIR6875-201ENST00000617506 72 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 MIR6810-201ENST00000622701 70 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AC091905.1-201ENST00000624400 311 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 CASC19-284ENST00000642142 1868 ntBASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
CCDC65Q8IXS2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AC083799.1-201ENST00000366451 910 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 U1.1-201ENST00000384101 164 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 SNORA3.3-201ENST00000408712 125 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AC104629.2-201ENST00000468627 598 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AC010683.1-201ENST00000473673 378 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 BTF3L4P4-201ENST00000506381 449 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 RNU6-347P-201ENST00000516658 105 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AC022695.1-201ENST00000522089 237 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AL161713.1-201ENST00000555538 145 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 MIR4286-201ENST00000580651 93 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AC053481.4-201ENST00000583164 216 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 AL391261.4-201ENST00000616012 481 ntBASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC65Q8IXS2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 RNU1-89P-201ENST00000384592 164 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 Z98941.1-201ENST00000407764 100 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 RN7SKP222-201ENST00000410651 315 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 RPS12P23-201ENST00000419579 400 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 MTCO1P57-201ENST00000432182 261 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 RSL24D1P2-201ENST00000445584 366 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 NUTF2P7-201ENST00000453086 375 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AL136097.1-201ENST00000456945 913 ntBASIC4.22□□□□□ -1.73
CCDC65Q8IXS2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms