Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 SELENOWP1-201ENST00000322792 252 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 RNY1P12-201ENST00000364251 105 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 DHFRP6-201ENST00000401776 268 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 RPS7P15-201ENST00000415804 584 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 UQCRBP1-201ENST00000421129 336 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC099677.3-201ENST00000427081 395 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 SRIP2-201ENST00000428470 166 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 GPR143P-201ENST00000434155 205 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC002381.1-201ENST00000447049 280 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 TCEA1P1-201ENST00000449716 880 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 PPIAP27-201ENST00000453800 265 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 HMGB1P4-201ENST00000455362 567 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 Z83838.1-202ENST00000456225 839 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AP1S2P1-201ENST00000457344 379 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 RN7SL168P-201ENST00000463821 279 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC023194.2-201ENST00000465398 406 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC098847.1-201ENST00000473094 348 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 TMEM248P1-201ENST00000510579 951 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 Y_RNA.691-201ENST00000516611 103 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC011853.1-201ENST00000518911 454 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AP002373.2-201ENST00000541631 1060 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 CYCSP38-201ENST00000559840 322 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 SNORD39.3-201ENST00000584451 71 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC115621.1-201ENST00000604653 858 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AL355802.3-201ENST00000607571 545 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AL021918.2-201ENST00000613415 194 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC233309.1-201ENST00000619522 751 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 SNX18P12-201ENST00000624821 759 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AL161756.3-201ENST00000641216 2071 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 AC012254.3-201ENST00000591183 2117 ntBASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UBE3DQ7Z6J8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC108467.2-201ENST00000617640 1597 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 RN7SKP187-201ENST00000365536 330 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 RNU6-744P-201ENST00000365557 107 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 RNU6-1316P-201ENST00000384242 108 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 RNU6-316P-201ENST00000391027 107 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AL031679.1-201ENST00000400616 525 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 RGS17P1-201ENST00000423358 553 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 SETP9-201ENST00000423837 832 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AL445928.1-201ENST00000435545 222 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AL627308.1-201ENST00000435693 821 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 BX679664.2-201ENST00000439282 283 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 ATP5LP2-201ENST00000440646 311 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC079781.2-201ENST00000446424 169 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC005077.1-201ENST00000449226 375 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 GEMIN2P1-201ENST00000454246 752 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC130509.1-201ENST00000464158 433 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC092865.4-201ENST00000477936 615 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 RN7SL741P-201ENST00000482473 289 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 RPL38P3-201ENST00000484463 213 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 TRBV5-2-201ENST00000489095 273 ntBASIC5.65□□□□□ -1.5
UBE3DQ7Z6J8 AC010587.1-201ENST00000505809 469 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms