Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC106871.1-201ENST00000568324 3102 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AL355852.1-201ENST00000454081 1771 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 ANKRD36P1-201ENST00000344424 659 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 RPL7P53-201ENST00000421245 739 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC245028.1-201ENST00000423259 256 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AL009174.1-201ENST00000426577 416 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AL358794.1-201ENST00000445689 381 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 HMGN2P21-201ENST00000447764 270 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AP000893.1-201ENST00000474462 794 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC015724.1-201ENST00000478577 156 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 RPL23AP72-201ENST00000492447 435 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 MTCO1P30-201ENST00000515244 580 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 SNORA19.3-201ENST00000516165 130 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 RNU6-415P-201ENST00000516252 97 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 RNU6-416P-201ENST00000516265 103 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 RNA5SP309-201ENST00000516670 106 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 MTCYBP28-201ENST00000566728 1132 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC006270.2-201ENST00000578523 652 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC069061.3-201ENST00000582254 823 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AL353726.1-201ENST00000614041 1000 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC104985.3-201ENST00000623479 597 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC068620.4-201ENST00000636730 1182 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 AC025263.3-201ENST00000622965 1396 ntBASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUP54Q7Z3B4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC021146.4-201ENST00000309229 279 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 ZNF602P-201ENST00000405929 924 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 RPS7P9-201ENST00000414704 586 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC004854.1-201ENST00000440356 349 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 MTCO1P53-201ENST00000441633 699 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 RPS20P32-201ENST00000456044 356 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 UBE2V1P12-201ENST00000503954 474 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 RN7SKP92-201ENST00000517266 244 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC091163.3-201ENST00000518269 1144 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AP001207.2-201ENST00000519490 539 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC090151.1-201ENST00000520784 730 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AF279873.1-201ENST00000523393 313 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 OR5BC1P-201ENST00000529327 739 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms