Protein–RNA interactions for Protein: Q6ZRR7

LRRC9, Leucine-rich repeat-containing protein 9, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9Q6ZRR7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.35□□□□□ -1.55
LRRC9Q6ZRR7 AL158062.1-201ENST00000619632 745 ntBASIC5.35□□□□□ -1.55
LRRC9Q6ZRR7 AC103858.2-201ENST00000621471 543 ntBASIC5.35□□□□□ -1.55
LRRC9Q6ZRR7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LRRC9Q6ZRR7 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC9Q6ZRR7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC9Q6ZRR7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 SNORA48.5-201ENST00000391143 135 ntBASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 SYT14P1-201ENST00000481459 721 ntBASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 AC026333.2-201ENST00000542164 106 ntBASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 AC015813.6-201ENST00000624409 5808 ntBASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC9Q6ZRR7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC9Q6ZRR7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC9Q6ZRR7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.34□□□□□ -1.56
LRRC9Q6ZRR7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 BX323014.1-201ENST00000412876 237 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 AC006989.1-201ENST00000427212 131 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 SKP1P1-201ENST00000438081 489 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 RPL5P23-201ENST00000496040 868 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 AC010285.3-201ENST00000511668 676 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 AC020914.4-201ENST00000597690 277 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 YPEL5P2-201ENST00000605553 359 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 AL354976.1-201ENST00000613843 387 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 OTUD4P1-201ENST00000237841 3067 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 NMD3P1-201ENST00000439704 1488 ntBASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC9Q6ZRR7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 USP9YP36-201ENST00000424581 829 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 USP9YP31-201ENST00000431405 881 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 AC005229.2-201ENST00000456995 399 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 BTF3P5-201ENST00000457252 467 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 RPS3AP14-201ENST00000483907 780 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 PRELID3BP6-201ENST00000503839 571 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 DUXAP6-201ENST00000553858 601 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 AL121576.1-201ENST00000556055 276 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 AC233280.2-201ENST00000603917 1070 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 MIR7112-201ENST00000616126 65 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 AC068647.1-201ENST00000489539 2265 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 CR381670.1-201ENST00000624291 1693 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 RNU1-89P-201ENST00000384592 164 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 RPS3AP50-201ENST00000487064 803 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 EIF4BP1-201ENST00000554881 351 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 AC010680.3-201ENST00000604215 520 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.32□□□□□ -1.56
LRRC9Q6ZRR7 DDX6P1-205ENST00000441966 1436 ntBASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 BMS1P3-201ENST00000372011 932 ntBASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 RN7SKP284-201ENST00000411002 343 ntBASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 AL831737.1-201ENST00000441288 271 ntBASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 RPL21P10-201ENST00000463521 490 ntBASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 MIR4276-201ENST00000584832 70 ntBASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 MTCO3P22-201ENST00000603219 784 ntBASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.31□□□□□ -1.56
LRRC9Q6ZRR7 AL133383.2-201ENST00000622958 2336 ntBASIC5.3□□□□□ -1.56
LRRC9Q6ZRR7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LRRC9Q6ZRR7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRRC9Q6ZRR7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRRC9Q6ZRR7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRRC9Q6ZRR7 UBA52P6-201ENST00000399822 382 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms