Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 CPHL1P-201ENST00000461341 3407 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 CR381670.1-201ENST00000624291 1693 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC083843.3-201ENST00000623679 2186 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 RNU6-729P-201ENST00000384399 107 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 RNA5SP296-201ENST00000410523 111 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 RN7SKP106-201ENST00000410832 272 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 RAD23BP2-201ENST00000416003 1207 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 OR6C64P-201ENST00000419708 825 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC006960.1-201ENST00000419980 153 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 FTLP19-201ENST00000433300 394 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 CEACAMP6-201ENST00000452007 574 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AL109741.2-201ENST00000455561 343 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 RPL23AP65-201ENST00000475608 468 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC090013.1-201ENST00000485147 480 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC083982.1-201ENST00000485679 344 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 OR11I1P-201ENST00000486033 954 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC231760.1-201ENST00000498002 260 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC116353.3-201ENST00000511215 249 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 snoZ278.1-201ENST00000517059 112 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 OR5AK3P-201ENST00000527486 1297 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 HMGB2P1-201ENST00000591146 634 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC068790.7-201ENST00000602347 528 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC103792.1-201ENST00000603591 919 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AL031281.1-201ENST00000604049 488 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC021749.1-201ENST00000604322 607 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC010201.1-201ENST00000605051 540 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC096553.1-201ENST00000605169 829 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC073114.1-201ENST00000612027 490 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AL353726.1-201ENST00000614041 1000 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AL158063.1-201ENST00000615349 536 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC092656.1-203ENST00000624134 423 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC007494.3-201ENST00000624660 743 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 OR2L1P-202ENST00000641567 1023 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC125257.1-201ENST00000560400 2930 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC025263.3-201ENST00000622965 1396 ntBASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.49□□□□□ -1.69
ZNF549Q6P9A3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC108467.2-201ENST00000617640 1597 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC000367.1-201ENST00000452711 1766 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 NXPH1-205ENST00000602349 1953 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 RNU1-63P-201ENST00000383902 164 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 Y_RNA.465-201ENST00000384293 102 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 RNU6-1263P-201ENST00000384601 106 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AL133270.1-201ENST00000402635 279 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 RNU6-757P-201ENST00000410334 100 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC022028.1-201ENST00000412054 408 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC004022.2-201ENST00000413824 193 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 UBE2V1P10-201ENST00000414685 269 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 IFNNP1-201ENST00000429219 553 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 CDY14P-201ENST00000431260 1014 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 RPL23AP93-201ENST00000440847 484 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC097499.1-201ENST00000444277 208 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 CDY23P-201ENST00000451661 1014 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 SBDSP1-204ENST00000453858 737 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 SEPT7P3-201ENST00000455017 621 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 NDUFA12P1-201ENST00000455914 406 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 RPL35AP28-201ENST00000459730 331 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 RN7SL41P-201ENST00000476144 297 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC091959.2-201ENST00000477363 321 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC108022.1-201ENST00000493466 478 ntBASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
ZNF549Q6P9A3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms