Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AC104763.2-201ENST00000604179 382 ntBASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AC136601.2-201ENST00000604356 474 ntBASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AC009464.1-201ENST00000615731 469 ntBASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNAPC4Q5SXM2 Z95331.1-201ENST00000623075 23112 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 ZNF90P1-201ENST00000480493 1951 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 SAGE2P-201ENST00000420011 2126 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 OR5AW1P-201ENST00000426334 1006 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 PTP4A1P3-201ENST00000433661 420 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 Y_RNA.638-201ENST00000459374 113 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 TRBV12-2-201ENST00000489763 344 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 FCF1P8-201ENST00000510322 597 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 FTH1P11-201ENST00000517577 551 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 AC011503.2-201ENST00000594230 1500 ntBASIC5.69□□□□□ -1.5
SNAPC4Q5SXM2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 SNORA5B-201ENST00000363786 132 ntBASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 OOSP1P1-201ENST00000423265 274 ntBASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 AC096638.2-201ENST00000434965 711 ntBASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 AC233702.9-201ENST00000581528 203 ntBASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNAPC4Q5SXM2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 MIR422A-201ENST00000362286 90 ntBASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 NPM1P39-201ENST00000449818 867 ntBASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 AC135001.1-201ENST00000544546 283 ntBASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SNAPC4Q5SXM2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 MIR449A-201ENST00000362113 91 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 RNU6-729P-201ENST00000384399 107 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 MIR513A2-201ENST00000385249 127 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 HLFP1-201ENST00000402375 499 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 NPM1P48-201ENST00000436002 853 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 RNU6-579P-201ENST00000516879 102 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 RPL12P22-201ENST00000519073 490 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 AC087276.1-201ENST00000529659 480 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 AC092868.3-201ENST00000560515 784 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 AC073657.2-201ENST00000605661 303 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 AC007998.5-201ENST00000622938 237 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 DDX6P1-205ENST00000441966 1436 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 HSPA8P19-201ENST00000505359 1517 ntBASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNAPC4Q5SXM2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 RNU1-18P-201ENST00000363062 164 ntBASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 RHOT1P2-201ENST00000366423 333 ntBASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 AC006028.1-201ENST00000438379 402 ntBASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 RPS29P31-201ENST00000446147 164 ntBASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 SUMO2P20-201ENST00000520803 283 ntBASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 AC018442.3-201ENST00000523025 183 ntBASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.65□□□□□ -1.5
SNAPC4Q5SXM2 AC067852.3-201ENST00000589177 561 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms