Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 MAPK10-304ENST00000641341 3984 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 SNORA48.4-201ENST00000391089 134 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 HMGB1P17-201ENST00000403495 628 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 BTBD10P2-201ENST00000404779 676 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 RPS15AP40-201ENST00000419621 391 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AL360081.1-201ENST00000428299 555 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC008065.1-201ENST00000428525 348 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC244035.1-201ENST00000430042 390 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 RPL23AP74-201ENST00000437246 471 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC073648.4-201ENST00000442655 781 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC097484.1-201ENST00000471148 389 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 FAM172BP-201ENST00000487497 1089 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 FTH1P11-201ENST00000517577 551 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AL022161.1-201ENST00000604390 213 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC005084.1-201ENST00000605160 304 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC073114.1-201ENST00000612027 490 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 EIF3FP1-201ENST00000613970 806 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 MIR6839-201ENST00000620425 113 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC091905.4-201ENST00000623432 202 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC091965.5-201ENST00000624785 342 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 AC006927.3-201ENST00000638789 384 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC144BQ3MJ40 ZNF833P-201ENST00000424938 1494 ntBASIC5.96□□□□□ -1.45
CCDC144BQ3MJ40 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
CCDC144BQ3MJ40 AC092747.4-201ENST00000620519 1861 ntBASIC5.96□□□□□ -1.45
CCDC144BQ3MJ40 CASC19-221ENST00000641309 1382 ntBASIC5.96□□□□□ -1.45
CCDC144BQ3MJ40 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 GJA6P-201ENST00000415117 1042 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RPL26P29-201ENST00000415623 438 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AL049610.1-201ENST00000423374 372 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 PTMAP3-201ENST00000447474 330 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RPS15AP17-201ENST00000470598 390 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 SETP11-201ENST00000473027 690 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AP000797.2-201ENST00000475768 606 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RPL5P22-201ENST00000480199 884 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AC023424.1-201ENST00000496058 459 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RN7SL591P-201ENST00000496150 292 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 ARL4AP1-201ENST00000503220 705 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 MTND5P13-201ENST00000513046 1079 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 OR4A45P-201ENST00000529954 901 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AC092851.1-201ENST00000535964 478 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RN7SL802P-201ENST00000577858 299 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AC022884.2-201ENST00000578535 580 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 MTCYBP22-201ENST00000603788 447 ntBASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 AC092653.1-201ENST00000608509 531 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms