Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.66□□□□□ -1.66
COL16A1Q07092 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL16A1Q07092 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL16A1Q07092 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL16A1Q07092 HSPA8P19-201ENST00000505359 1517 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL16A1Q07092 SMG1P4-204ENST00000523028 4131 ntBASIC4.66□□□□□ -1.66
COL16A1Q07092 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL16A1Q07092 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.65□□□□□ -1.66
COL16A1Q07092 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.65□□□□□ -1.66
COL16A1Q07092 AF228730.2-201ENST00000438784 848 ntBASIC4.65□□□□□ -1.66
COL16A1Q07092 RPS29P31-201ENST00000446147 164 ntBASIC4.65□□□□□ -1.66
COL16A1Q07092 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.65□□□□□ -1.66
COL16A1Q07092 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.65□□□□□ -1.66
COL16A1Q07092 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.65□□□□□ -1.66
COL16A1Q07092 RN7SL863P-201ENST00000462370 296 ntBASIC4.65□□□□□ -1.66
COL16A1Q07092 PPBPP1-201ENST00000510807 373 ntBASIC4.65□□□□□ -1.66
COL16A1Q07092 HMGB3P13-201ENST00000511263 607 ntBASIC4.65□□□□□ -1.66
COL16A1Q07092 LDHBP3-201ENST00000514909 822 ntBASIC4.65□□□□□ -1.66
COL16A1Q07092 RNU6-579P-201ENST00000516879 102 ntBASIC4.65□□□□□ -1.66
COL16A1Q07092 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.65□□□□□ -1.66
COL16A1Q07092 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.65□□□□□ -1.66
COL16A1Q07092 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.65□□□□□ -1.66
COL16A1Q07092 AP003400.6-201ENST00000624698 740 ntBASIC4.65□□□□□ -1.66
COL16A1Q07092 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL16A1Q07092 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.65□□□□□ -1.66
COL16A1Q07092 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL16A1Q07092 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
COL16A1Q07092 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL16A1Q07092 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.66
COL16A1Q07092 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL16A1Q07092 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
COL16A1Q07092 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL16A1Q07092 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL16A1Q07092 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
COL16A1Q07092 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.65□□□□□ -1.67
COL16A1Q07092 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.65□□□□□ -1.67
COL16A1Q07092 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL16A1Q07092 RPL35AP12-201ENST00000425362 338 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.64□□□□□ -1.67
COL16A1Q07092 SETP5-201ENST00000437270 562 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.64□□□□□ -1.67
COL16A1Q07092 AC005008.1-201ENST00000456151 612 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.64□□□□□ -1.67
COL16A1Q07092 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.64□□□□□ -1.67
COL16A1Q07092 AC015802.5-201ENST00000607478 399 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 PCA3_2.1-201ENST00000612507 409 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 AC105227.2-201ENST00000615075 605 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 AL137790.1-201ENST00000634283 177 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL16A1Q07092 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.64□□□□□ -1.67
COL16A1Q07092 AP000542.2-201ENST00000623199 6179 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL16A1Q07092 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL16A1Q07092 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL16A1Q07092 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
COL16A1Q07092 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
COL16A1Q07092 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL16A1Q07092 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL16A1Q07092 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL16A1Q07092 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL16A1Q07092 TNPO1P3-201ENST00000436471 2662 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 U3.39-201ENST00000408569 239 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 NPM1P39-201ENST00000449818 867 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 HMGB1P5-202ENST00000451497 985 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.64□□□□□ -1.67
COL16A1Q07092 AC114982.2-201ENST00000461396 358 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 AL035404.1-201ENST00000497982 568 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 AC021678.1-201ENST00000505195 936 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 AC008885.1-201ENST00000514930 301 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 GTF3AP2-201ENST00000557014 266 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 AC067852.3-201ENST00000589177 561 ntBASIC4.64□□□□□ -1.67
COL16A1Q07092 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL16A1Q07092 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL16A1Q07092 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL16A1Q07092 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL16A1Q07092 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.64□□□□□ -1.67
COL16A1Q07092 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL16A1Q07092 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.63□□□□□ -1.67
COL16A1Q07092 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL16A1Q07092 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL16A1Q07092 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.63□□□□□ -1.67
COL16A1Q07092 SAGE2P-201ENST00000420011 2126 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL16A1Q07092 RNU4-82P-201ENST00000362443 140 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 HMGN1P24-201ENST00000412282 298 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 AL139413.1-201ENST00000421309 217 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.63□□□□□ -1.67
COL16A1Q07092 AC069285.2-201ENST00000440210 275 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 AC140076.1-201ENST00000449897 361 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.63□□□□□ -1.67
COL16A1Q07092 AC099563.1-201ENST00000456086 418 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 S100A11P1-201ENST00000477525 312 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.63□□□□□ -1.67
COL16A1Q07092 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.63□□□□□ -1.67
COL16A1Q07092 AC010374.2-201ENST00000512933 535 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.63□□□□□ -1.67
COL16A1Q07092 CYP4A43P-201ENST00000568156 121 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 AC067852.4-201ENST00000590314 478 ntBASIC4.63□□□□□ -1.67
COL16A1Q07092 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms