Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AC005921.1-201ENST00000510589 286 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 RN7SKP83-201ENST00000516512 178 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 SUMO2P20-201ENST00000520803 283 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 RN7SL600P-201ENST00000581811 299 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 BRDTP1-201ENST00000605735 677 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AC018816.2-201ENST00000621460 353 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AC090506.2-201ENST00000624521 419 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 AC048347.1-201ENST00000624621 427 ntBASIC2.92□□□□□ -1.94
HIST1H1AQ02539 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HIST1H1AQ02539 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AL672296.1-201ENST00000427780 2158 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC118273.1-201ENST00000525324 3006 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 SNORA31-201ENST00000362607 130 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 RNA5SP97-201ENST00000365006 84 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 MIR591-201ENST00000385290 95 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 RPL21P65-201ENST00000406094 466 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC017079.2-201ENST00000416102 485 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 RPS7P5-201ENST00000441482 581 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 RPL6P9-201ENST00000466502 859 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 HMGB1P21-201ENST00000502313 581 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 MGST2-204ENST00000506797 634 ntTSL 2 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC008011.1-201ENST00000545989 227 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 NPM1P47-201ENST00000560843 856 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC090877.1-201ENST00000561418 344 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC105036.1-201ENST00000566222 271 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 RNA5SP108-201ENST00000605921 117 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AP003117.2-201ENST00000606010 545 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC019131.2-201ENST00000609071 870 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AL445423.1-201ENST00000609941 536 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 PLCE1P1-201ENST00000622094 305 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AP003072.4-201ENST00000624580 310 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 OR6C71P-202ENST00000641886 1107 ntBASIC2.91□□□□□ -1.94
HIST1H1AQ02539 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.91□□□□□ -1.94
HIST1H1AQ02539 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
HIST1H1AQ02539 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HIST1H1AQ02539 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HIST1H1AQ02539 AL079305.1-201ENST00000623159 3008 ntBASIC2.9□□□□□ -1.94
HIST1H1AQ02539 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HIST1H1AQ02539 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.9□□□□□ -1.94
HIST1H1AQ02539 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.9□□□□□ -1.94
HIST1H1AQ02539 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AL022722.2-201ENST00000402519 180 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 Z97055.1-201ENST00000419730 712 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 RCC2P2-201ENST00000422174 918 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 NEK4P1-201ENST00000433383 879 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AL356276.2-201ENST00000435919 558 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 TBCAP1-201ENST00000436520 327 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.9□□□□□ -1.95
HIST1H1AQ02539 AC120057.2-201ENST00000571520 271 ntBASIC2.9□□□□□ -1.95
HIST1H1AQ02539 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms