Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL592436.1-201ENST00000605135 558 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC015802.5-201ENST00000607478 399 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL645927.2-201ENST00000618350 349 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC079684.1-201ENST00000621405 437 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL118508.4-201ENST00000624142 1176 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC009452.1-201ENST00000640823 606 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AL118496.1-201ENST00000440201 1812 ntBASIC3.67□□□□□ -1.82
HMGCS1Q01581 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
HMGCS1Q01581 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS1Q01581 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS1Q01581 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS1Q01581 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS1Q01581 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS1Q01581 RNA5SP515-201ENST00000364570 118 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 SNORA62.2-201ENST00000364672 152 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 RNA5SP97-201ENST00000365006 84 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 FABP12P1-201ENST00000401911 322 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 RNU6-628P-201ENST00000410675 107 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 NDUFA5P10-201ENST00000432147 357 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 AC245517.2-201ENST00000442890 346 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 RPL21P89-201ENST00000444021 467 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 TPRKBP1-201ENST00000456243 481 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 RNU7-27P-201ENST00000459281 62 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 FTH1P21-201ENST00000512179 511 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 AC022695.1-201ENST00000522089 237 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 OR8R1P-201ENST00000543943 764 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 AC092747.2-201ENST00000545069 983 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 AGGF1P6-201ENST00000569213 976 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS1Q01581 uc_338.32-201ENST00000615087 172 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 AC139769.3-201ENST00000618383 175 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 AL356489.2-201ENST00000566968 3528 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS1Q01581 AC090229.1-201ENST00000590983 1609 ntBASIC3.66□□□□□ -1.82
HMGCS1Q01581 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS1Q01581 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGCS1Q01581 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
HMGCS1Q01581 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
HMGCS1Q01581 FAM91A3P-201ENST00000456826 2544 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 DDX6P1-205ENST00000441966 1436 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS1Q01581 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS1Q01581 RNU6-31P-201ENST00000384388 108 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 RN7SKP177-201ENST00000410567 355 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 RPL26P37-201ENST00000411983 438 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 RPL21P109-201ENST00000422213 475 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS1Q01581 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 AC010307.1-201ENST00000467206 836 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 AP000926.1-201ENST00000479573 241 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 AL161747.1-201ENST00000480068 358 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 AC090543.1-201ENST00000492168 485 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 TPT1P3-201ENST00000492841 512 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS1Q01581 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 SS18L2P2-201ENST00000583960 235 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 AC003001.2-201ENST00000616294 831 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS1Q01581 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS1Q01581 AC095050.2-201ENST00000510748 1458 ntBASIC3.65□□□□□ -1.83
HMGCS1Q01581 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS1Q01581 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS1Q01581 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HMGCS1Q01581 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS1Q01581 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS1Q01581 MTCO1P14-201ENST00000441695 1559 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS1Q01581 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HMGCS1Q01581 RNA5SP479-201ENST00000364858 117 ntBASIC3.64□□□□□ -1.83
HMGCS1Q01581 RNU6-40P-201ENST00000384254 107 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms