Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
PRKDCP78527 BCLAF1P2-201ENST00000624956 2609 ntBASIC2.45□□□□□ -2.02
PRKDCP78527 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC2.45□□□□□ -2.02
PRKDCP78527 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.45□□□□□ -2.02
PRKDCP78527 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.45□□□□□ -2.02
PRKDCP78527 RPL23AP89-201ENST00000439324 255 ntBASIC2.45□□□□□ -2.02
PRKDCP78527 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.45□□□□□ -2.02
PRKDCP78527 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.45□□□□□ -2.02
PRKDCP78527 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC2.45□□□□□ -2.02
PRKDCP78527 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.45□□□□□ -2.02
PRKDCP78527 AC027281.1-201ENST00000574178 758 ntBASIC2.45□□□□□ -2.02
PRKDCP78527 SLC25A36P1-201ENST00000590111 465 ntBASIC2.45□□□□□ -2.02
PRKDCP78527 ATP1B3P1-201ENST00000605365 821 ntBASIC2.45□□□□□ -2.02
PRKDCP78527 AC026979.4-201ENST00000606555 645 ntBASIC2.45□□□□□ -2.02
PRKDCP78527 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PRKDCP78527 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRKDCP78527 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.44□□□□□ -2.02
PRKDCP78527 MIR512-1-201ENST00000384913 84 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 SETP9-201ENST00000423837 832 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 MAPRE1P3-201ENST00000435438 796 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.44□□□□□ -2.02
PRKDCP78527 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.44□□□□□ -2.02
PRKDCP78527 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.44□□□□□ -2.02
PRKDCP78527 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.44□□□□□ -2.02
PRKDCP78527 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
PRKDCP78527 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
PRKDCP78527 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.44□□□□□ -2.02
PRKDCP78527 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
PRKDCP78527 AL391417.1-201ENST00000404100 426 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 AL031584.1-201ENST00000447169 754 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 AC133134.1-201ENST00000466800 359 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC2.44□□□□□ -2.02
PRKDCP78527 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 RPS24P12-201ENST00000402084 394 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.44□□□□□ -2.02
PRKDCP78527 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 AC023161.2-201ENST00000551218 780 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.44□□□□□ -2.02
PRKDCP78527 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.44□□□□□ -2.02
PRKDCP78527 H3F3AP1-201ENST00000559984 334 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC2.44□□□□□ -2.02
PRKDCP78527 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 Z83843.1-201ENST00000604070 3685 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRKDCP78527 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.44□□□□□ -2.02
PRKDCP78527 AC009963.1-201ENST00000417265 157 ntBASIC2.44□□□□□ -2.02
PRKDCP78527 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.44□□□□□ -2.02
PRKDCP78527 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.44□□□□□ -2.02
PRKDCP78527 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
PRKDCP78527 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PRKDCP78527 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
PRKDCP78527 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 AL445529.1-201ENST00000398713 389 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC2.43□□□□□ -2.02
PRKDCP78527 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.43□□□□□ -2.02
PRKDCP78527 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.43□□□□□ -2.02
PRKDCP78527 NDUFB9P3-201ENST00000521269 501 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 AP002812.4-201ENST00000532139 286 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC2.43□□□□□ -2.02
PRKDCP78527 MTND6P33-201ENST00000571794 183 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 VN1R90P-201ENST00000595717 726 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 SNORD91B-202ENST00000608459 222 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 MIR7702-201ENST00000621931 59 ntBASIC2.43□□□□□ -2.02
PRKDCP78527 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC2.43□□□□□ -2.02
PRKDCP78527 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKDCP78527 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms