Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH6P55285 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH6P55285 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH6P55285 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH6P55285 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH6P55285 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CDH6P55285 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH6P55285 RNA5SP283-201ENST00000365604 119 ntBASIC3.98□□□□□ -1.77
CDH6P55285 RNU1-89P-201ENST00000384592 164 ntBASIC3.98□□□□□ -1.77
CDH6P55285 ZNF603P-201ENST00000405613 487 ntBASIC3.98□□□□□ -1.77
CDH6P55285 RN7SKP56-201ENST00000410513 331 ntBASIC3.98□□□□□ -1.77
CDH6P55285 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH6P55285 AL445528.1-201ENST00000426330 420 ntBASIC3.98□□□□□ -1.77
CDH6P55285 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.98□□□□□ -1.77
CDH6P55285 RPL34P26-201ENST00000445636 354 ntBASIC3.98□□□□□ -1.77
CDH6P55285 AC098824.1-201ENST00000453565 980 ntBASIC3.98□□□□□ -1.77
CDH6P55285 AC084198.1-201ENST00000477747 402 ntBASIC3.98□□□□□ -1.77
CDH6P55285 AC010285.3-201ENST00000511668 676 ntBASIC3.98□□□□□ -1.77
CDH6P55285 RNU6-551P-201ENST00000516661 103 ntBASIC3.98□□□□□ -1.77
CDH6P55285 RNA5SP143-201ENST00000516936 115 ntBASIC3.98□□□□□ -1.77
CDH6P55285 OR8R1P-201ENST00000543943 764 ntBASIC3.98□□□□□ -1.77
CDH6P55285 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH6P55285 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.98□□□□□ -1.77
CDH6P55285 AC091515.1-201ENST00000548110 679 ntBASIC3.98□□□□□ -1.77
CDH6P55285 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH6P55285 AC009101.1-201ENST00000568135 242 ntBASIC3.98□□□□□ -1.77
CDH6P55285 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH6P55285 AL606490.9-201ENST00000603331 271 ntBASIC3.98□□□□□ -1.77
CDH6P55285 AC110741.2-201ENST00000605278 268 ntBASIC3.98□□□□□ -1.77
CDH6P55285 BRDTP1-201ENST00000605735 677 ntBASIC3.98□□□□□ -1.77
CDH6P55285 AC091905.1-201ENST00000624400 311 ntBASIC3.98□□□□□ -1.77
CDH6P55285 AC016717.3-201ENST00000624730 554 ntBASIC3.98□□□□□ -1.77
CDH6P55285 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH6P55285 AF001550.2-201ENST00000636643 217 ntBASIC3.98□□□□□ -1.77
CDH6P55285 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH6P55285 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH6P55285 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH6P55285 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH6P55285 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH6P55285 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
CDH6P55285 NCAPGP1-201ENST00000505112 1814 ntBASIC3.98□□□□□ -1.77
CDH6P55285 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH6P55285 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH6P55285 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH6P55285 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH6P55285 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CDH6P55285 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH6P55285 RNU6-452P-201ENST00000384406 107 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH6P55285 OR5AW1P-201ENST00000426334 1006 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH6P55285 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH6P55285 MRPS33P4-201ENST00000434892 317 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH6P55285 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH6P55285 AC103987.1-201ENST00000473394 348 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AC068305.1-201ENST00000497406 726 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AC010460.1-201ENST00000507087 466 ntBASIC3.97□□□□□ -1.77
CDH6P55285 PRELID3BP5-201ENST00000508612 460 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH6P55285 RAC1P2-201ENST00000511164 579 ntBASIC3.97□□□□□ -1.77
CDH6P55285 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH6P55285 RNA5SP208-201ENST00000516156 78 ntBASIC3.97□□□□□ -1.77
CDH6P55285 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH6P55285 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH6P55285 SUMO2P20-201ENST00000520803 283 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AC022695.1-201ENST00000522089 237 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH6P55285 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH6P55285 MIR4286-201ENST00000580651 93 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AC005255.1-201ENST00000593748 216 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AL133247.2-201ENST00000603236 482 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AL137849.1-201ENST00000604767 169 ntBASIC3.97□□□□□ -1.77
CDH6P55285 LINC00216-201ENST00000623548 1126 ntBASIC3.97□□□□□ -1.77
CDH6P55285 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH6P55285 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH6P55285 FAM91A3P-201ENST00000456826 2544 ntBASIC3.97□□□□□ -1.77
CDH6P55285 AC017007.4-201ENST00000503353 1352 ntBASIC3.97□□□□□ -1.77
CDH6P55285 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH6P55285 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH6P55285 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH6P55285 AC006504.1-201ENST00000562493 3666 ntBASIC3.97□□□□□ -1.77
CDH6P55285 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CDH6P55285 EXOC5P1-201ENST00000510543 1969 ntBASIC3.96□□□□□ -1.77
CDH6P55285 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH6P55285 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH6P55285 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH6P55285 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH6P55285 RNU1-87P-201ENST00000363727 170 ntBASIC3.96□□□□□ -1.78
CDH6P55285 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
CDH6P55285 RNU6-213P-201ENST00000384051 104 ntBASIC3.96□□□□□ -1.78
CDH6P55285 HMGN2P8-201ENST00000391458 268 ntBASIC3.96□□□□□ -1.78
CDH6P55285 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH6P55285 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH6P55285 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH6P55285 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH6P55285 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH6P55285 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH6P55285 CYCSP53-201ENST00000455540 265 ntBASIC3.96□□□□□ -1.78
CDH6P55285 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms