Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.6□□□□□ -1.67
RAD23BP54727 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.6□□□□□ -1.67
RAD23BP54727 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.6□□□□□ -1.67
RAD23BP54727 AC112673.1-201ENST00000513168 575 ntBASIC4.6□□□□□ -1.67
RAD23BP54727 AC119751.1-201ENST00000513357 765 ntBASIC4.6□□□□□ -1.67
RAD23BP54727 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.6□□□□□ -1.67
RAD23BP54727 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.6□□□□□ -1.67
RAD23BP54727 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.6□□□□□ -1.67
RAD23BP54727 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAD23BP54727 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.6□□□□□ -1.67
RAD23BP54727 MTCO1P40-201ENST00000574371 625 ntBASIC4.6□□□□□ -1.67
RAD23BP54727 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.6□□□□□ -1.67
RAD23BP54727 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.6□□□□□ -1.67
RAD23BP54727 AC113368.1-201ENST00000603736 382 ntBASIC4.6□□□□□ -1.67
RAD23BP54727 AC024060.1-201ENST00000607052 494 ntBASIC4.6□□□□□ -1.67
RAD23BP54727 AC009237.15-201ENST00000610252 501 ntBASIC4.6□□□□□ -1.67
RAD23BP54727 AL445363.3-201ENST00000623080 671 ntBASIC4.6□□□□□ -1.67
RAD23BP54727 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAD23BP54727 ATE1-AS1-202ENST00000636460 506 ntBASIC4.6□□□□□ -1.67
RAD23BP54727 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.6□□□□□ -1.67
RAD23BP54727 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAD23BP54727 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAD23BP54727 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAD23BP54727 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAD23BP54727 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAD23BP54727 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RAD23BP54727 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAD23BP54727 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RAD23BP54727 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAD23BP54727 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAD23BP54727 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.59□□□□□ -1.67
RAD23BP54727 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.59□□□□□ -1.67
RAD23BP54727 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAD23BP54727 OR10J6P-201ENST00000289731 930 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAD23BP54727 ANKRD36P1-201ENST00000344424 659 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 SNORD74.4-201ENST00000364129 80 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 RNU1-132P-201ENST00000364300 164 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 RNU4-68P-201ENST00000364314 141 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAD23BP54727 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAD23BP54727 RNU4-25P-201ENST00000410569 230 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.59□□□□□ -1.67
RAD23BP54727 RAC1P8-201ENST00000427086 527 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 SKP1P3-201ENST00000429280 487 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.59□□□□□ -1.67
RAD23BP54727 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.59□□□□□ -1.67
RAD23BP54727 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RAD23BP54727 PTMAP3-201ENST00000447474 330 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 ABCF2P2-201ENST00000450549 296 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AC098826.2-201ENST00000452011 651 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.59□□□□□ -1.67
RAD23BP54727 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.59□□□□□ -1.67
RAD23BP54727 CDC42P1-201ENST00000456658 548 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AC096992.1-201ENST00000459808 709 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.59□□□□□ -1.67
RAD23BP54727 AC020898.1-201ENST00000474167 787 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 RN7SL691P-201ENST00000494487 301 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAD23BP54727 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.59□□□□□ -1.67
RAD23BP54727 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.59□□□□□ -1.67
RAD23BP54727 snoZ278.1-201ENST00000517059 112 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.59□□□□□ -1.67
RAD23BP54727 AF186190.1-201ENST00000517470 480 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AC008694.2-201ENST00000517591 306 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.59□□□□□ -1.67
RAD23BP54727 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
RAD23BP54727 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RAD23BP54727 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.59□□□□□ -1.67
RAD23BP54727 AL109766.1-201ENST00000555080 552 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.59□□□□□ -1.67
RAD23BP54727 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.59□□□□□ -1.67
RAD23BP54727 AP001542.2-201ENST00000593141 364 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AC005261.4-201ENST00000600047 1385 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AC022022.2-201ENST00000602989 360 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 MTND3P19-201ENST00000603825 345 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AL357094.1-201ENST00000603845 844 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AL158163.1-201ENST00000603915 1649 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 BNIP3P4-201ENST00000604946 565 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.59□□□□□ -1.67
RAD23BP54727 AC011330.2-201ENST00000621680 635 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAD23BP54727 AC019278.1-201ENST00000623516 479 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AP002967.1-201ENST00000624203 539 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 AP000676.4-201ENST00000624659 623 ntBASIC4.59□□□□□ -1.67
RAD23BP54727 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.59□□□□□ -1.67
RAD23BP54727 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RAD23BP54727 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RAD23BP54727 AC006971.1-201ENST00000407916 4486 ntBASIC4.58□□□□□ -1.68
RAD23BP54727 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAD23BP54727 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAD23BP54727 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RAD23BP54727 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.58□□□□□ -1.68
RAD23BP54727 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RAD23BP54727 AC067945.1-201ENST00000342609 618 ntBASIC4.58□□□□□ -1.68
RAD23BP54727 RNU6-1339P-201ENST00000363574 91 ntBASIC4.58□□□□□ -1.68
RAD23BP54727 ATP5F1P2-201ENST00000398143 760 ntBASIC4.58□□□□□ -1.68
RAD23BP54727 VN1R8P-201ENST00000407739 893 ntBASIC4.58□□□□□ -1.68
RAD23BP54727 RNA5SP39-201ENST00000411245 120 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms