Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC004552.1-201ENST00000419089 348 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.92□□□□□ -1.62
CLTCL1P53675 HMGB1P16-201ENST00000447155 540 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 RPS26P3-201ENST00000470205 348 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 AC109925.1-201ENST00000478069 331 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 AC090543.2-201ENST00000483963 348 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 AC004057.1-201ENST00000485827 348 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 AC098799.1-201ENST00000504752 800 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 AL121766.1-201ENST00000547436 487 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 AC020914.4-201ENST00000597690 277 ntBASIC4.92□□□□□ -1.62
CLTCL1P53675 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
CLTCL1P53675 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CLTCL1P53675 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CLTCL1P53675 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLTCL1P53675 AC027290.2-201ENST00000623210 18662 ntBASIC4.91□□□□□ -1.62
CLTCL1P53675 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.91□□□□□ -1.62
CLTCL1P53675 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLTCL1P53675 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLTCL1P53675 HSPE1P8-201ENST00000406997 288 ntBASIC4.91□□□□□ -1.62
CLTCL1P53675 Z99755.1-201ENST00000414048 380 ntBASIC4.91□□□□□ -1.62
CLTCL1P53675 OR6C71P-201ENST00000432580 913 ntBASIC4.91□□□□□ -1.62
CLTCL1P53675 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.91□□□□□ -1.62
CLTCL1P53675 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.91□□□□□ -1.62
CLTCL1P53675 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.91□□□□□ -1.62
CLTCL1P53675 IGHV3-32-201ENST00000519182 355 ntBASIC4.91□□□□□ -1.62
CLTCL1P53675 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.91□□□□□ -1.62
CLTCL1P53675 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLTCL1P53675 BRDTP1-201ENST00000605735 677 ntBASIC4.91□□□□□ -1.62
CLTCL1P53675 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLTCL1P53675 NMD3P1-201ENST00000439704 1488 ntBASIC4.91□□□□□ -1.62
CLTCL1P53675 AL353743.1-202ENST00000431724 1695 ntBASIC4.91□□□□□ -1.62
CLTCL1P53675 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CLTCL1P53675 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.91□□□□□ -1.62
CLTCL1P53675 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CLTCL1P53675 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLTCL1P53675 OR1AA1P-201ENST00000419597 916 ntBASIC4.9□□□□□ -1.62
CLTCL1P53675 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.9□□□□□ -1.62
CLTCL1P53675 AC097262.1-201ENST00000452559 548 ntBASIC4.9□□□□□ -1.62
CLTCL1P53675 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.9□□□□□ -1.62
CLTCL1P53675 HMGB3P14-201ENST00000494195 599 ntBASIC4.9□□□□□ -1.62
CLTCL1P53675 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.9□□□□□ -1.62
CLTCL1P53675 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.9□□□□□ -1.62
CLTCL1P53675 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.9□□□□□ -1.62
CLTCL1P53675 AC084036.1-201ENST00000609190 508 ntBASIC4.9□□□□□ -1.62
CLTCL1P53675 AC103858.2-201ENST00000621471 543 ntBASIC4.9□□□□□ -1.62
CLTCL1P53675 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.9□□□□□ -1.62
CLTCL1P53675 AC073073.2-201ENST00000609827 2578 ntBASIC4.9□□□□□ -1.62
CLTCL1P53675 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLTCL1P53675 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLTCL1P53675 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CLTCL1P53675 FAM35DP-201ENST00000323387 2712 ntBASIC4.9□□□□□ -1.63
CLTCL1P53675 BX842559.1-201ENST00000419615 532 ntBASIC4.9□□□□□ -1.63
CLTCL1P53675 RPS26P47-201ENST00000427219 348 ntBASIC4.9□□□□□ -1.63
CLTCL1P53675 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.9□□□□□ -1.63
CLTCL1P53675 RPS3AP50-201ENST00000487064 803 ntBASIC4.9□□□□□ -1.63
CLTCL1P53675 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.9□□□□□ -1.63
CLTCL1P53675 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.9□□□□□ -1.63
CLTCL1P53675 AL049840.6-202ENST00000603373 279 ntBASIC4.9□□□□□ -1.63
CLTCL1P53675 AC105227.2-201ENST00000615075 605 ntBASIC4.9□□□□□ -1.63
CLTCL1P53675 HSPA8P19-201ENST00000505359 1517 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLTCL1P53675 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLTCL1P53675 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLTCL1P53675 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLTCL1P53675 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLTCL1P53675 AC000123.3-201ENST00000624029 4975 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.89□□□□□ -1.63
CLTCL1P53675 HMGN2P8-201ENST00000391458 268 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CLTCL1P53675 UBE2V1P1-201ENST00000430836 445 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 AC006994.1-201ENST00000438212 839 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 SYT14P1-201ENST00000481459 721 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 RN7SKP289-201ENST00000517244 295 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 DUXAP6-201ENST00000553858 601 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 AC023389.2-201ENST00000580031 955 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 MIR3124-201ENST00000582636 67 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 MIMT1-201ENST00000597105 1050 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 AC015802.5-201ENST00000607478 399 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 AL158062.1-201ENST00000619632 745 ntBASIC4.89□□□□□ -1.63
CLTCL1P53675 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.89□□□□□ -1.63
CLTCL1P53675 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLTCL1P53675 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLTCL1P53675 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLTCL1P53675 AC024341.1-201ENST00000526444 1552 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.88□□□□□ -1.63
CLTCL1P53675 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLTCL1P53675 AC005332.5-201ENST00000591222 2919 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLTCL1P53675 GSTA8P-201ENST00000404253 637 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.88□□□□□ -1.63
CLTCL1P53675 RPL37P3-201ENST00000456825 293 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 AC023598.1-201ENST00000472521 361 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.88□□□□□ -1.63
CLTCL1P53675 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.88□□□□□ -1.63
CLTCL1P53675 AC090136.1-201ENST00000520009 240 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.88□□□□□ -1.63
CLTCL1P53675 AC138932.5-201ENST00000617759 563 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 RMST_9.1-201ENST00000619945 193 ntBASIC4.88□□□□□ -1.63
CLTCL1P53675 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CLTCL1P53675 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms