Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL356276.2-201ENST00000435919 558 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.39□□□□□ -1.71
LHX1P48742 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.39□□□□□ -1.71
LHX1P48742 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.39□□□□□ -1.71
LHX1P48742 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.39□□□□□ -1.71
LHX1P48742 DNAJC19P8-201ENST00000452887 259 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.39□□□□□ -1.71
LHX1P48742 AL132838.2-201ENST00000492041 314 ntBASIC4.39□□□□□ -1.71
LHX1P48742 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LHX1P48742 AC008427.1-201ENST00000503102 655 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.39□□□□□ -1.71
LHX1P48742 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.39□□□□□ -1.71
LHX1P48742 SMARCE1P4-201ENST00000523647 241 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.39□□□□□ -1.71
LHX1P48742 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.39□□□□□ -1.71
LHX1P48742 AC090312.2-201ENST00000582687 378 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AC110743.1-201ENST00000584870 478 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.39□□□□□ -1.71
LHX1P48742 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.39□□□□□ -1.71
LHX1P48742 AC133552.5-201ENST00000604266 540 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AC067959.1-201ENST00000604334 379 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.39□□□□□ -1.71
LHX1P48742 AC022079.2-201ENST00000619739 566 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.39□□□□□ -1.71
LHX1P48742 AC004808.1-201ENST00000627671 721 ntBASIC4.39□□□□□ -1.71
LHX1P48742 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.39□□□□□ -1.71
LHX1P48742 CDRT1-208ENST00000630868 794 ntBASIC4.39□□□□□ -1.71
LHX1P48742 AL356118.1-201ENST00000635272 1078 ntBASIC4.39□□□□□ -1.71
LHX1P48742 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LHX1P48742 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.39□□□□□ -1.71
LHX1P48742 AL118496.1-201ENST00000440201 1812 ntBASIC4.39□□□□□ -1.71
LHX1P48742 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LHX1P48742 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LHX1P48742 Z82217.1-201ENST00000625157 8149 ntBASIC4.39□□□□□ -1.71
LHX1P48742 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LHX1P48742 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LHX1P48742 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LHX1P48742 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LHX1P48742 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LHX1P48742 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LHX1P48742 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LHX1P48742 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.38□□□□□ -1.71
LHX1P48742 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LHX1P48742 RNA5SP513-201ENST00000364648 118 ntBASIC4.38□□□□□ -1.71
LHX1P48742 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LHX1P48742 MIR1193-201ENST00000408109 78 ntBASIC4.38□□□□□ -1.71
LHX1P48742 AC096533.1-201ENST00000411645 353 ntBASIC4.38□□□□□ -1.71
LHX1P48742 TPT1P2-201ENST00000413105 503 ntBASIC4.38□□□□□ -1.71
LHX1P48742 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.38□□□□□ -1.71
LHX1P48742 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.38□□□□□ -1.71
LHX1P48742 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.38□□□□□ -1.71
LHX1P48742 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.38□□□□□ -1.71
LHX1P48742 ARF4P4-201ENST00000439608 520 ntBASIC4.38□□□□□ -1.71
LHX1P48742 AC009263.1-201ENST00000441193 1239 ntBASIC4.38□□□□□ -1.71
LHX1P48742 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
LHX1P48742 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.38□□□□□ -1.71
LHX1P48742 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.38□□□□□ -1.71
LHX1P48742 OR51B8P-201ENST00000449892 769 ntBASIC4.38□□□□□ -1.71
LHX1P48742 AC239809.1-201ENST00000450470 217 ntBASIC4.38□□□□□ -1.71
LHX1P48742 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.38□□□□□ -1.71
LHX1P48742 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.38□□□□□ -1.71
LHX1P48742 CCDC75P1-201ENST00000469247 791 ntBASIC4.38□□□□□ -1.71
LHX1P48742 RPS26P28-201ENST00000470806 348 ntBASIC4.38□□□□□ -1.71
LHX1P48742 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.38□□□□□ -1.71
LHX1P48742 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
LHX1P48742 HMGB1P38-201ENST00000490557 577 ntBASIC4.38□□□□□ -1.71
LHX1P48742 RPL29P14-201ENST00000495837 428 ntBASIC4.38□□□□□ -1.71
LHX1P48742 AC069306.1-201ENST00000507006 843 ntBASIC4.38□□□□□ -1.71
LHX1P48742 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.38□□□□□ -1.71
LHX1P48742 AF186190.1-201ENST00000517470 480 ntBASIC4.38□□□□□ -1.71
LHX1P48742 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.38□□□□□ -1.71
LHX1P48742 OR8R1P-201ENST00000543943 764 ntBASIC4.38□□□□□ -1.71
LHX1P48742 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.38□□□□□ -1.71
LHX1P48742 AC023824.3-201ENST00000569003 562 ntBASIC4.38□□□□□ -1.71
LHX1P48742 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.38□□□□□ -1.71
LHX1P48742 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.38□□□□□ -1.71
LHX1P48742 AC017104.5-201ENST00000637647 639 ntBASIC4.38□□□□□ -1.71
LHX1P48742 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.38□□□□□ -1.71
LHX1P48742 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LHX1P48742 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LHX1P48742 AC104118.1-201ENST00000607625 1589 ntBASIC4.38□□□□□ -1.71
LHX1P48742 LINC01109-201ENST00000603837 3081 ntBASIC4.38□□□□□ -1.71
LHX1P48742 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.38□□□□□ -1.71
LHX1P48742 RLIMP1-201ENST00000339626 1680 ntBASIC4.38□□□□□ -1.71
LHX1P48742 NSRP1P1-201ENST00000444067 1693 ntBASIC4.38□□□□□ -1.71
LHX1P48742 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LHX1P48742 AL451142.2-201ENST00000429076 2090 ntBASIC4.37□□□□□ -1.71
LHX1P48742 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 AC022031.1-201ENST00000585985 2593 ntBASIC4.37□□□□□ -1.71
LHX1P48742 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LHX1P48742 RN7SKP224-201ENST00000364140 325 ntBASIC4.37□□□□□ -1.71
LHX1P48742 RNA5SP515-201ENST00000364570 118 ntBASIC4.37□□□□□ -1.71
LHX1P48742 SNORA57.1-201ENST00000391227 145 ntBASIC4.37□□□□□ -1.71
LHX1P48742 PPIAP31-201ENST00000405422 495 ntBASIC4.37□□□□□ -1.71
LHX1P48742 RNU6-628P-201ENST00000410675 107 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms