Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AC000123.3-201ENST00000624029 4975 ntBASIC4.8□□□□□ -1.64
HTR3AP46098 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HTR3AP46098 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.8□□□□□ -1.64
HTR3AP46098 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.8□□□□□ -1.64
HTR3AP46098 HSPA8P18-201ENST00000439846 1928 ntBASIC4.8□□□□□ -1.64
HTR3AP46098 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HTR3AP46098 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
HTR3AP46098 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 DDX18P5-201ENST00000534547 1306 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.79□□□□□ -1.64
HTR3AP46098 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.79□□□□□ -1.64
HTR3AP46098 RN7SKP160-201ENST00000363804 340 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 AC013442.1-201ENST00000397347 228 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 RPS15AP38-201ENST00000413110 372 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.79□□□□□ -1.64
HTR3AP46098 AC098592.1-201ENST00000419352 333 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 PSMA6P3-201ENST00000428242 164 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AL035407.1-201ENST00000429211 571 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.79□□□□□ -1.64
HTR3AP46098 CLUHP1-201ENST00000435012 1190 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AL137845.2-201ENST00000444292 988 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.79□□□□□ -1.64
HTR3AP46098 VN1R40P-201ENST00000455196 941 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 SUMO2P2-201ENST00000456482 255 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 SIAH1P1-201ENST00000479411 923 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.79□□□□□ -1.64
HTR3AP46098 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.79□□□□□ -1.64
HTR3AP46098 HMGB3P16-201ENST00000508037 287 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC006390.1-201ENST00000508068 283 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC007016.1-201ENST00000512110 244 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.79□□□□□ -1.64
HTR3AP46098 RNA5SP362-201ENST00000516048 118 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC012400.1-201ENST00000518452 381 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.79□□□□□ -1.64
HTR3AP46098 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.79□□□□□ -1.64
HTR3AP46098 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.79□□□□□ -1.64
HTR3AP46098 OR4P1P-201ENST00000530808 1136 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC024224.1-201ENST00000538284 609 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.79□□□□□ -1.64
HTR3AP46098 DYNLL1P4-201ENST00000549314 266 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC126177.5-201ENST00000549599 178 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.79□□□□□ -1.64
HTR3AP46098 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.79□□□□□ -1.64
HTR3AP46098 AC090888.2-201ENST00000559765 1144 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 RN7SL708P-201ENST00000580952 299 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.79□□□□□ -1.64
HTR3AP46098 RNU6-88P-201ENST00000606801 100 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.79□□□□□ -1.64
HTR3AP46098 AC015914.2-201ENST00000618167 288 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.79□□□□□ -1.64
HTR3AP46098 AC135068.12-201ENST00000637370 931 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 CASC19-264ENST00000641912 1184 ntBASIC4.79□□□□□ -1.64
HTR3AP46098 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HTR3AP46098 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HTR3AP46098 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTR3AP46098 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.78□□□□□ -1.64
HTR3AP46098 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HTR3AP46098 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HTR3AP46098 ZNF542P-204ENST00000482727 1305 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HTR3AP46098 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.78□□□□□ -1.64
HTR3AP46098 AC092747.4-201ENST00000620519 1861 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTR3AP46098 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTR3AP46098 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HTR3AP46098 SNORA73.1-201ENST00000363107 205 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HTR3AP46098 MIR589-201ENST00000385238 99 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HTR3AP46098 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.78□□□□□ -1.64
HTR3AP46098 AL356131.1-201ENST00000405826 414 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 RN7SKP206-201ENST00000410823 293 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 RAP1BP1-201ENST00000412709 553 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.78□□□□□ -1.64
HTR3AP46098 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.78□□□□□ -1.64
HTR3AP46098 AC083875.1-201ENST00000419509 405 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 RPL36AP10-201ENST00000421785 322 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 MTCO2P5-201ENST00000422621 426 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 AC234781.2-201ENST00000426370 994 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
HTR3AP46098 OR2B7P-201ENST00000429302 934 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 RPS6P15-201ENST00000431996 751 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 RPL36AP15-201ENST00000444514 266 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 AL031584.1-201ENST00000447169 754 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 AC104634.1-201ENST00000452720 462 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 MEMO1P3-201ENST00000459811 302 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 MTCO2P6-201ENST00000463134 685 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 RN7SL814P-201ENST00000487715 300 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 RPL15P21-201ENST00000495592 567 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 ARL4AP1-201ENST00000503220 705 ntBASIC4.78□□□□□ -1.64
HTR3AP46098 AC006499.2-201ENST00000513470 337 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms