Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.26□□□□□ -1.73
SSR1P43307 U3.44-201ENST00000458938 192 ntBASIC4.26□□□□□ -1.73
SSR1P43307 RPL38P1-201ENST00000460914 211 ntBASIC4.26□□□□□ -1.73
SSR1P43307 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.26□□□□□ -1.73
SSR1P43307 AP002884.2-201ENST00000471647 395 ntBASIC4.26□□□□□ -1.73
SSR1P43307 RN7SL604P-201ENST00000492589 296 ntBASIC4.26□□□□□ -1.73
SSR1P43307 MTATP6P22-201ENST00000507369 598 ntBASIC4.26□□□□□ -1.73
SSR1P43307 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.26□□□□□ -1.73
SSR1P43307 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.26□□□□□ -1.73
SSR1P43307 CDH12P4-201ENST00000517835 295 ntBASIC4.26□□□□□ -1.73
SSR1P43307 CDH12P3-201ENST00000517935 295 ntBASIC4.26□□□□□ -1.73
SSR1P43307 CDH12P1-201ENST00000518435 295 ntBASIC4.26□□□□□ -1.73
SSR1P43307 PTP4A1P6-201ENST00000531034 478 ntBASIC4.26□□□□□ -1.73
SSR1P43307 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.26□□□□□ -1.73
SSR1P43307 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.26□□□□□ -1.73
SSR1P43307 MIR5684-201ENST00000585074 65 ntBASIC4.26□□□□□ -1.73
SSR1P43307 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSR1P43307 LINC00216-201ENST00000623548 1126 ntBASIC4.26□□□□□ -1.73
SSR1P43307 MIR3653-201ENST00000625572 110 ntBASIC4.26□□□□□ -1.73
SSR1P43307 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.26□□□□□ -1.73
SSR1P43307 AL672296.1-201ENST00000427780 2158 ntBASIC4.26□□□□□ -1.73
SSR1P43307 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSR1P43307 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSR1P43307 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSR1P43307 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSR1P43307 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.25□□□□□ -1.73
SSR1P43307 RNU11-4P-201ENST00000391149 133 ntBASIC4.25□□□□□ -1.73
SSR1P43307 SNORA48.8-201ENST00000391324 134 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC007256.1-201ENST00000392253 2765 ntBASIC4.25□□□□□ -1.73
SSR1P43307 MIR1251-201ENST00000408552 70 ntBASIC4.25□□□□□ -1.73
SSR1P43307 HSPE1P12-201ENST00000412576 301 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC013404.1-201ENST00000413068 249 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.25□□□□□ -1.73
SSR1P43307 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.25□□□□□ -1.73
SSR1P43307 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.25□□□□□ -1.73
SSR1P43307 AC023141.6-201ENST00000429418 337 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC087650.1-201ENST00000431445 468 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSR1P43307 BTF3P10-201ENST00000433415 495 ntBASIC4.25□□□□□ -1.73
SSR1P43307 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.25□□□□□ -1.73
SSR1P43307 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.25□□□□□ -1.73
SSR1P43307 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.25□□□□□ -1.73
SSR1P43307 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSR1P43307 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.25□□□□□ -1.73
SSR1P43307 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.25□□□□□ -1.73
SSR1P43307 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.25□□□□□ -1.73
SSR1P43307 RNA5SP246-201ENST00000458909 119 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC092691.2-201ENST00000461787 803 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC006463.2-201ENST00000473326 348 ntBASIC4.25□□□□□ -1.73
SSR1P43307 RPL23AP44-201ENST00000482216 473 ntBASIC4.25□□□□□ -1.73
SSR1P43307 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.25□□□□□ -1.73
SSR1P43307 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.25□□□□□ -1.73
SSR1P43307 AC109458.1-201ENST00000508858 316 ntBASIC4.25□□□□□ -1.73
SSR1P43307 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSR1P43307 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.25□□□□□ -1.73
SSR1P43307 AC074029.2-201ENST00000551045 634 ntBASIC4.25□□□□□ -1.73
SSR1P43307 SS18L2P2-201ENST00000583960 235 ntBASIC4.25□□□□□ -1.73
SSR1P43307 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.25□□□□□ -1.73
SSR1P43307 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.25□□□□□ -1.73
SSR1P43307 AC114878.2-201ENST00000604863 1251 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC090525.3-201ENST00000605601 189 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC090425.2-201ENST00000608818 501 ntBASIC4.25□□□□□ -1.73
SSR1P43307 AC055764.2-201ENST00000610089 670 ntBASIC4.25□□□□□ -1.73
SSR1P43307 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSR1P43307 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSR1P43307 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSR1P43307 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.24□□□□□ -1.73
SSR1P43307 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.24□□□□□ -1.73
SSR1P43307 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SSR1P43307 AC118273.1-201ENST00000525324 3006 ntBASIC4.24□□□□□ -1.73
SSR1P43307 OR11H4-201ENST00000315409 1082 ntBASIC4.24□□□□□ -1.73
SSR1P43307 SNORA60-201ENST00000362396 134 ntBASIC4.24□□□□□ -1.73
SSR1P43307 AC108032.1-201ENST00000416706 207 ntBASIC4.24□□□□□ -1.73
SSR1P43307 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.24□□□□□ -1.73
SSR1P43307 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.24□□□□□ -1.73
SSR1P43307 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.24□□□□□ -1.73
SSR1P43307 RPS27AP12-201ENST00000429552 465 ntBASIC4.24□□□□□ -1.73
SSR1P43307 AL356535.1-201ENST00000440335 398 ntBASIC4.24□□□□□ -1.73
SSR1P43307 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.24□□□□□ -1.73
SSR1P43307 TPT1P13-201ENST00000449760 499 ntBASIC4.24□□□□□ -1.73
SSR1P43307 PTGES3P5-201ENST00000455109 434 ntBASIC4.24□□□□□ -1.73
SSR1P43307 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.24□□□□□ -1.73
SSR1P43307 RNU7-27P-201ENST00000459281 62 ntBASIC4.24□□□□□ -1.73
SSR1P43307 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SSR1P43307 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.24□□□□□ -1.73
SSR1P43307 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.24□□□□□ -1.73
SSR1P43307 RNU6-491P-201ENST00000516099 110 ntBASIC4.24□□□□□ -1.73
SSR1P43307 SNORA31.9-201ENST00000516429 84 ntBASIC4.24□□□□□ -1.73
SSR1P43307 SOD1P3-201ENST00000518682 454 ntBASIC4.24□□□□□ -1.73
SSR1P43307 RAB9BP1-201ENST00000519581 626 ntBASIC4.24□□□□□ -1.73
SSR1P43307 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.24□□□□□ -1.73
SSR1P43307 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.24□□□□□ -1.73
SSR1P43307 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.24□□□□□ -1.73
SSR1P43307 SNORA51-201ENST00000606420 132 ntBASIC4.24□□□□□ -1.73
SSR1P43307 AC011816.2-201ENST00000607089 556 ntBASIC4.24□□□□□ -1.73
SSR1P43307 AL355816.1-201ENST00000607951 118 ntBASIC4.24□□□□□ -1.73
SSR1P43307 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.24□□□□□ -1.73
SSR1P43307 AC008121.2-201ENST00000614647 523 ntBASIC4.24□□□□□ -1.73
SSR1P43307 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSR1P43307 AC020763.5-201ENST00000623298 430 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms