Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA13P31271 AC010376.1-201ENST00000522101 334 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 AC118942.1-201ENST00000529674 1035 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXA13P31271 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA13P31271 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXA13P31271 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA13P31271 ZNF971P-201ENST00000562068 1249 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 BNIP3P5-201ENST00000562290 498 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 AC106785.1-201ENST00000565935 262 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXA13P31271 AGGF1P6-201ENST00000569213 976 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 AP005262.1-201ENST00000582646 997 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 AC090312.2-201ENST00000582687 378 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXA13P31271 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA13P31271 AC084824.4-201ENST00000620106 731 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA13P31271 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA13P31271 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA13P31271 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
HOXA13P31271 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HOXA13P31271 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA13P31271 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HOXA13P31271 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA13P31271 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA13P31271 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXA13P31271 AL353743.4-201ENST00000422653 1547 ntBASIC4.72□□□□□ -1.65
HOXA13P31271 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXA13P31271 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA13P31271 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA13P31271 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA13P31271 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
HOXA13P31271 FAM91A3P-201ENST00000456826 2544 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA13P31271 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA13P31271 RN7SKP280-201ENST00000364196 304 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA13P31271 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HOXA13P31271 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA13P31271 HSPE1P12-201ENST00000412576 301 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 RPS23P10-201ENST00000416185 486 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 TAF13P2-201ENST00000416876 286 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA13P31271 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA13P31271 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA13P31271 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA13P31271 AL592437.1-201ENST00000443781 492 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA13P31271 SEPT14P24-201ENST00000447236 180 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 PTMAP3-201ENST00000447474 330 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA13P31271 AC239809.1-201ENST00000450470 217 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 EIF4A1P11-201ENST00000451239 222 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA13P31271 PRELID3BP4-201ENST00000515476 571 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 RNU6-276P-201ENST00000516114 96 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 AC139103.1-201ENST00000534696 1030 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA13P31271 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXA13P31271 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA13P31271 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA13P31271 AC018552.3-201ENST00000567416 561 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA13P31271 AC009948.4-201ENST00000604692 675 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA13P31271 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA13P31271 AC013468.1-201ENST00000608680 598 ntBASIC4.71□□□□□ -1.66
HOXA13P31271 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA13P31271 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA13P31271 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA13P31271 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HOXA13P31271 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA13P31271 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA13P31271 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA13P31271 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA13P31271 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA13P31271 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 USP9YP4-201ENST00000424401 1745 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXA13P31271 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXA13P31271 SNORA11-201ENST00000408789 128 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 RNU4-6P-201ENST00000410804 122 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 KCTD10P1-201ENST00000434203 625 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 HMGB1P45-201ENST00000435986 653 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AC002542.1-201ENST00000440683 193 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 RPS4XP4-201ENST00000443195 763 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 RPL21P89-201ENST00000444021 467 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms