Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 TNPO1P3-201ENST00000436471 2662 ntBASIC4.07□□□□□ -1.76
COL4A5P29400 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A5P29400 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
COL4A5P29400 RNU1-140P-201ENST00000365040 165 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 RNA5SP126-201ENST00000365092 109 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A5P29400 RPL21P109-201ENST00000422213 475 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A5P29400 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A5P29400 RN7SL863P-201ENST00000462370 296 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 AC112198.1-201ENST00000505369 1220 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 AC110794.1-201ENST00000505816 425 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A5P29400 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.06□□□□□ -1.76
COL4A5P29400 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
COL4A5P29400 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.06□□□□□ -1.76
COL4A5P29400 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A5P29400 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A5P29400 AL732372.2-225ENST00000642124 456 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A5P29400 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A5P29400 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A5P29400 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
COL4A5P29400 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A5P29400 AC073073.2-201ENST00000609827 2578 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A5P29400 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A5P29400 MIR422A-201ENST00000362286 90 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A5P29400 SNORA48.8-201ENST00000391324 134 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A5P29400 ATP5C1P1-201ENST00000441945 895 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 OR4R3P-201ENST00000525084 838 ntBASIC4.06□□□□□ -1.76
COL4A5P29400 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.06□□□□□ -1.76
COL4A5P29400 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A5P29400 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A5P29400 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A5P29400 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
COL4A5P29400 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A5P29400 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL4A5P29400 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A5P29400 USP8P1-201ENST00000494673 3183 ntBASIC4.05□□□□□ -1.76
COL4A5P29400 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL4A5P29400 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A5P29400 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A5P29400 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.05□□□□□ -1.76
COL4A5P29400 Z99755.1-201ENST00000414048 380 ntBASIC4.05□□□□□ -1.76
COL4A5P29400 EIF4EP1-201ENST00000422311 642 ntBASIC4.05□□□□□ -1.76
COL4A5P29400 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A5P29400 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.05□□□□□ -1.76
COL4A5P29400 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.05□□□□□ -1.76
COL4A5P29400 AC092809.1-201ENST00000441469 474 ntBASIC4.05□□□□□ -1.76
COL4A5P29400 AC008885.1-201ENST00000514930 301 ntBASIC4.05□□□□□ -1.76
COL4A5P29400 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.05□□□□□ -1.76
COL4A5P29400 AL353600.1-201ENST00000608148 251 ntBASIC4.05□□□□□ -1.76
COL4A5P29400 BNIP3P41-202ENST00000616656 861 ntBASIC4.05□□□□□ -1.76
COL4A5P29400 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.05□□□□□ -1.76
COL4A5P29400 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL4A5P29400 AL078595.2-201ENST00000605309 1780 ntBASIC4.05□□□□□ -1.76
COL4A5P29400 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A5P29400 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A5P29400 AC063923.1-201ENST00000478982 1619 ntBASIC4.04□□□□□ -1.76
COL4A5P29400 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.04□□□□□ -1.76
COL4A5P29400 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.04□□□□□ -1.76
COL4A5P29400 RN7SKP199-201ENST00000410325 305 ntBASIC4.04□□□□□ -1.76
COL4A5P29400 RNU4-47P-201ENST00000410876 114 ntBASIC4.04□□□□□ -1.76
COL4A5P29400 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.04□□□□□ -1.76
COL4A5P29400 AL353678.1-201ENST00000422735 741 ntBASIC4.04□□□□□ -1.76
COL4A5P29400 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.04□□□□□ -1.76
COL4A5P29400 RPS4XP2-201ENST00000458402 793 ntBASIC4.04□□□□□ -1.76
COL4A5P29400 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.04□□□□□ -1.76
COL4A5P29400 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.04□□□□□ -1.76
COL4A5P29400 AC118465.1-201ENST00000513820 1271 ntBASIC4.04□□□□□ -1.76
COL4A5P29400 AC135001.1-201ENST00000544546 283 ntBASIC4.04□□□□□ -1.76
COL4A5P29400 AL162713.1-201ENST00000604480 262 ntBASIC4.04□□□□□ -1.76
COL4A5P29400 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.04□□□□□ -1.76
COL4A5P29400 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.04□□□□□ -1.76
COL4A5P29400 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A5P29400 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A5P29400 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A5P29400 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
COL4A5P29400 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.03□□□□□ -1.76
COL4A5P29400 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.03□□□□□ -1.76
COL4A5P29400 RNA5SP229-201ENST00000410809 99 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 AC074367.1-201ENST00000438685 1125 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 SETP4-201ENST00000455717 868 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 AC023598.1-201ENST00000472521 361 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.03□□□□□ -1.76
COL4A5P29400 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.03□□□□□ -1.76
COL4A5P29400 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.03□□□□□ -1.76
COL4A5P29400 AC005798.1-201ENST00000513715 387 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 TCP11X3P-202ENST00000514289 1254 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.03□□□□□ -1.76
COL4A5P29400 MIR7106-201ENST00000612419 65 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 NMD3P1-201ENST00000439704 1488 ntBASIC4.03□□□□□ -1.76
COL4A5P29400 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL4A5P29400 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
COL4A5P29400 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL4A5P29400 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL4A5P29400 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms