Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ENPP7P9-201ENST00000514456 627 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 FABP5P12-201ENST00000515543 389 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.47□□□□□ -1.69
ABCD3P28288 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.47□□□□□ -1.69
ABCD3P28288 C1GALT1P3-201ENST00000522049 819 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.47□□□□□ -1.69
ABCD3P28288 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.47□□□□□ -1.69
ABCD3P28288 AC005868.1-201ENST00000536421 331 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.47□□□□□ -1.69
ABCD3P28288 AC090502.2-201ENST00000549267 280 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC125611.1-201ENST00000549563 229 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC010198.2-201ENST00000550612 259 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.47□□□□□ -1.69
ABCD3P28288 AL389895.1-201ENST00000554127 252 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 HIGD1AP17-201ENST00000554576 276 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AL158211.1-201ENST00000566763 763 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.47□□□□□ -1.69
ABCD3P28288 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.47□□□□□ -1.69
ABCD3P28288 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.47□□□□□ -1.69
ABCD3P28288 AL121932.1-201ENST00000605542 214 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC107952.2-201ENST00000606048 486 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.47□□□□□ -1.69
ABCD3P28288 AL049539.1-201ENST00000611964 459 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC231759.1-201ENST00000616455 597 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC015914.2-201ENST00000618167 288 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AC069209.1-201ENST00000619282 651 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 AP000676.4-201ENST00000624659 623 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
ABCD3P28288 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ABCD3P28288 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
ABCD3P28288 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ABCD3P28288 ZNF876P-202ENST00000398732 1485 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ABCD3P28288 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ABCD3P28288 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.47□□□□□ -1.69
ABCD3P28288 AC007390.2-201ENST00000606229 3803 ntBASIC4.47□□□□□ -1.69
ABCD3P28288 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ABCD3P28288 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
ABCD3P28288 PABPC1P7-201ENST00000413177 1513 ntBASIC4.46□□□□□ -1.69
ABCD3P28288 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
ABCD3P28288 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ABCD3P28288 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.46□□□□□ -1.7
ABCD3P28288 AL136964.1-201ENST00000622038 2990 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 MTCO1P24-201ENST00000515438 1558 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ABCD3P28288 ZNF37BP-203ENST00000452306 1352 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
ABCD3P28288 RNU1-130P-201ENST00000363930 160 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ABCD3P28288 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ABCD3P28288 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 ATP5F1P1-201ENST00000433775 569 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 MTCYBP11-201ENST00000447254 1109 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 BTF3P6-201ENST00000448054 499 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 AC010733.1-201ENST00000451515 401 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 AC091685.2-201ENST00000454924 864 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 RPL35AP28-201ENST00000459730 331 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC063943.1-201ENST00000465434 453 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC092324.1-201ENST00000468671 324 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.46□□□□□ -1.7
ABCD3P28288 RN7SL558P-201ENST00000497468 299 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 ARL4AP1-201ENST00000503220 705 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 PRELID3BP5-201ENST00000508612 460 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 RNU5A-4P-201ENST00000516588 111 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 RNU6-709P-201ENST00000517257 104 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.46□□□□□ -1.7
ABCD3P28288 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.46□□□□□ -1.7
ABCD3P28288 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
ABCD3P28288 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.46□□□□□ -1.7
ABCD3P28288 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.46□□□□□ -1.7
ABCD3P28288 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 AC009097.3-201ENST00000563557 1018 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.46□□□□□ -1.7
ABCD3P28288 MIR3667-201ENST00000581025 74 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.46□□□□□ -1.7
ABCD3P28288 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.46□□□□□ -1.7
ABCD3P28288 YWHAQP7-201ENST00000603536 658 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 DUXAP3-201ENST00000603616 594 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AL009028.1-201ENST00000604895 802 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AL513477.2-201ENST00000607858 568 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 FAM25E-202ENST00000608562 189 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC116651.1-201ENST00000609724 556 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC140725.3-201ENST00000616193 880 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC012414.7-202ENST00000622705 1090 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AL356863.1-201ENST00000623378 1080 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.46□□□□□ -1.7
ABCD3P28288 AC120349.2-201ENST00000625002 298 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 MIR4278-201ENST00000636094 69 ntBASIC4.46□□□□□ -1.7
ABCD3P28288 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ABCD3P28288 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ABCD3P28288 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ABCD3P28288 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms