Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL391419.1-201ENST00000398901 1275 ntBASIC6.68□□□□□ -1.34
VARSP26640 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.68□□□□□ -1.34
VARSP26640 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.68□□□□□ -1.34
VARSP26640 RNA5SP280-201ENST00000411230 115 ntBASIC6.68□□□□□ -1.34
VARSP26640 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.68□□□□□ -1.34
VARSP26640 Z93019.1-201ENST00000416450 973 ntBASIC6.68□□□□□ -1.34
VARSP26640 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.68□□□□□ -1.34
VARSP26640 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.68□□□□□ -1.34
VARSP26640 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
VARSP26640 RPEP4-201ENST00000437636 602 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.68□□□□□ -1.34
VARSP26640 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.68□□□□□ -1.34
VARSP26640 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.68□□□□□ -1.34
VARSP26640 RPL23AP15-201ENST00000450202 459 ntBASIC6.68□□□□□ -1.34
VARSP26640 GOT2P2-201ENST00000450663 1251 ntBASIC6.68□□□□□ -1.34
VARSP26640 HMGN3P1-201ENST00000453847 193 ntBASIC6.68□□□□□ -1.34
VARSP26640 AL035090.1-201ENST00000454835 332 ntBASIC6.68□□□□□ -1.34
VARSP26640 SNRPFP3-201ENST00000457792 225 ntBASIC6.68□□□□□ -1.34
VARSP26640 RN7SL372P-201ENST00000461982 298 ntBASIC6.68□□□□□ -1.34
VARSP26640 RN7SL379P-201ENST00000479912 293 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC055855.1-201ENST00000489563 579 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC104109.1-201ENST00000498563 436 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC114324.2-202ENST00000503812 134 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.68□□□□□ -1.34
VARSP26640 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VARSP26640 RNU2-53P-201ENST00000516257 147 ntBASIC6.68□□□□□ -1.34
VARSP26640 Y_RNA.680-201ENST00000516441 93 ntBASIC6.68□□□□□ -1.34
VARSP26640 MIR4800-201ENST00000537353 80 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC007537.1-201ENST00000539347 327 ntBASIC6.68□□□□□ -1.34
VARSP26640 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.68□□□□□ -1.34
VARSP26640 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.68□□□□□ -1.34
VARSP26640 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.68□□□□□ -1.34
VARSP26640 AC138207.8-204ENST00000579588 527 ntBASIC6.68□□□□□ -1.34
VARSP26640 AL353997.4-201ENST00000586196 166 ntBASIC6.68□□□□□ -1.34
VARSP26640 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.68□□□□□ -1.34
VARSP26640 AC004805.2-201ENST00000605382 482 ntBASIC6.68□□□□□ -1.34
VARSP26640 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.68□□□□□ -1.34
VARSP26640 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.68□□□□□ -1.34
VARSP26640 AL138960.1-201ENST00000613838 513 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC008626.2-201ENST00000624425 248 ntBASIC6.68□□□□□ -1.34
VARSP26640 CDRT1-208ENST00000630868 794 ntBASIC6.68□□□□□ -1.34
VARSP26640 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
VARSP26640 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
VARSP26640 AL121950.1-201ENST00000624993 2077 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.68□□□□□ -1.34
VARSP26640 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VARSP26640 AC119674.1-204ENST00000641348 1343 ntBASIC6.68□□□□□ -1.34
VARSP26640 AC105114.1-201ENST00000624795 1862 ntBASIC6.68□□□□□ -1.34
VARSP26640 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VARSP26640 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
VARSP26640 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VARSP26640 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VARSP26640 TMCC1P1-201ENST00000518897 1980 ntBASIC6.68□□□□□ -1.34
VARSP26640 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.67□□□□□ -1.34
VARSP26640 AC244517.1-201ENST00000606030 2086 ntBASIC6.67□□□□□ -1.34
VARSP26640 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
VARSP26640 Y_RNA.212-201ENST00000364177 102 ntBASIC6.67□□□□□ -1.34
VARSP26640 RNU6-450P-201ENST00000364654 107 ntBASIC6.67□□□□□ -1.34
VARSP26640 RNU6-444P-201ENST00000383988 108 ntBASIC6.67□□□□□ -1.34
VARSP26640 LDHAP5-201ENST00000394996 622 ntBASIC6.67□□□□□ -1.34
VARSP26640 UBE2V1P2-201ENST00000397758 440 ntBASIC6.67□□□□□ -1.34
VARSP26640 RN7SKP268-201ENST00000411107 316 ntBASIC6.67□□□□□ -1.34
VARSP26640 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VARSP26640 AL591848.1-201ENST00000413092 322 ntBASIC6.67□□□□□ -1.34
VARSP26640 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.67□□□□□ -1.34
VARSP26640 AC068533.1-201ENST00000418542 415 ntBASIC6.67□□□□□ -1.34
VARSP26640 AC007365.2-201ENST00000428806 458 ntBASIC6.67□□□□□ -1.34
VARSP26640 HMGB1P9-201ENST00000429856 646 ntBASIC6.67□□□□□ -1.34
VARSP26640 AC114495.1-201ENST00000441274 436 ntBASIC6.67□□□□□ -1.34
VARSP26640 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.67□□□□□ -1.34
VARSP26640 AL133351.3-201ENST00000454998 193 ntBASIC6.67□□□□□ -1.34
VARSP26640 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.67□□□□□ -1.34
VARSP26640 RN7SL393P-201ENST00000463588 296 ntBASIC6.67□□□□□ -1.34
VARSP26640 RN7SL168P-201ENST00000463821 279 ntBASIC6.67□□□□□ -1.34
VARSP26640 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.67□□□□□ -1.34
VARSP26640 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC6.67□□□□□ -1.34
VARSP26640 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.67□□□□□ -1.34
VARSP26640 DCAF13P2-201ENST00000514188 555 ntBASIC6.67□□□□□ -1.34
VARSP26640 RNU6-488P-201ENST00000515918 99 ntBASIC6.67□□□□□ -1.34
VARSP26640 RN7SKP11-201ENST00000517018 287 ntBASIC6.67□□□□□ -1.34
VARSP26640 RNU6-699P-201ENST00000517081 110 ntBASIC6.67□□□□□ -1.34
VARSP26640 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.67□□□□□ -1.34
VARSP26640 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.67□□□□□ -1.34
VARSP26640 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.67□□□□□ -1.34
VARSP26640 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.67□□□□□ -1.34
VARSP26640 AC107958.1-201ENST00000556576 290 ntBASIC6.67□□□□□ -1.34
VARSP26640 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.67□□□□□ -1.34
VARSP26640 AC023043.2-201ENST00000589678 1026 ntBASIC6.67□□□□□ -1.34
VARSP26640 AC068790.3-201ENST00000602988 553 ntBASIC6.67□□□□□ -1.34
VARSP26640 AC098479.1-201ENST00000609225 154 ntBASIC6.67□□□□□ -1.34
VARSP26640 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARSP26640 uc_338.12-201ENST00000616344 181 ntBASIC6.67□□□□□ -1.34
VARSP26640 AL354702.2-202ENST00000641481 890 ntBASIC6.67□□□□□ -1.34
VARSP26640 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VARSP26640 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARSP26640 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
VARSP26640 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARSP26640 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.67□□□□□ -1.34
VARSP26640 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms