Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL645931.1-201ENST00000439737 410 ntBASIC3.16□□□□□ -1.9
CCL1P22362 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL1P22362 ANP32BP2-201ENST00000454525 545 ntBASIC3.16□□□□□ -1.9
CCL1P22362 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL1P22362 RPS20P21-201ENST00000466859 343 ntBASIC3.16□□□□□ -1.9
CCL1P22362 AC006511.1-201ENST00000470614 315 ntBASIC3.16□□□□□ -1.9
CCL1P22362 AC010460.1-201ENST00000507087 466 ntBASIC3.16□□□□□ -1.9
CCL1P22362 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL1P22362 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL1P22362 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL1P22362 AC092851.1-201ENST00000535964 478 ntBASIC3.16□□□□□ -1.9
CCL1P22362 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL1P22362 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL1P22362 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL1P22362 SS18L2P2-201ENST00000583960 235 ntBASIC3.16□□□□□ -1.9
CCL1P22362 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.16□□□□□ -1.9
CCL1P22362 AF230666.2-201ENST00000602328 725 ntBASIC3.16□□□□□ -1.9
CCL1P22362 AL391834.1-201ENST00000609609 560 ntBASIC3.16□□□□□ -1.9
CCL1P22362 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL1P22362 AL590410.1-201ENST00000617925 333 ntBASIC3.16□□□□□ -1.9
CCL1P22362 AL713922.2-201ENST00000619384 716 ntBASIC3.16□□□□□ -1.9
CCL1P22362 AP003072.4-201ENST00000624580 310 ntBASIC3.16□□□□□ -1.9
CCL1P22362 RNA5SP196-201ENST00000625967 102 ntBASIC3.16□□□□□ -1.9
CCL1P22362 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.16□□□□□ -1.9
CCL1P22362 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL1P22362 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL1P22362 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.16□□□□□ -1.9
CCL1P22362 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL1P22362 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCL1P22362 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.15□□□□□ -1.9
CCL1P22362 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCL1P22362 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.15□□□□□ -1.9
CCL1P22362 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCL1P22362 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL1P22362 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCL1P22362 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCL1P22362 RPL32P3-201ENST00000359025 275 ntBASIC3.15□□□□□ -1.91
CCL1P22362 RNU6-666P-201ENST00000363499 107 ntBASIC3.15□□□□□ -1.91
CCL1P22362 AC068538.1-201ENST00000376856 336 ntBASIC3.15□□□□□ -1.91
CCL1P22362 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCL1P22362 U3.39-201ENST00000408569 239 ntBASIC3.15□□□□□ -1.91
CCL1P22362 RNA5SP498-201ENST00000411342 120 ntBASIC3.15□□□□□ -1.91
CCL1P22362 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL1P22362 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL1P22362 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL1P22362 YY1P1-201ENST00000427625 668 ntBASIC3.15□□□□□ -1.91
CCL1P22362 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL1P22362 AL353093.1-201ENST00000441292 436 ntBASIC3.15□□□□□ -1.91
CCL1P22362 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL1P22362 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL1P22362 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCL1P22362 AL133162.1-201ENST00000463228 453 ntBASIC3.15□□□□□ -1.91
CCL1P22362 AL139099.1-201ENST00000497398 403 ntBASIC3.15□□□□□ -1.91
CCL1P22362 HPRT1P1-201ENST00000509498 657 ntBASIC3.15□□□□□ -1.91
CCL1P22362 ARL2BPP6-201ENST00000512757 439 ntBASIC3.15□□□□□ -1.91
CCL1P22362 FTH1P9-201ENST00000513251 355 ntBASIC3.15□□□□□ -1.91
CCL1P22362 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.15□□□□□ -1.91
CCL1P22362 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL1P22362 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL1P22362 AC023161.2-201ENST00000551218 780 ntBASIC3.15□□□□□ -1.91
CCL1P22362 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.15□□□□□ -1.91
CCL1P22362 AC067852.4-201ENST00000590314 478 ntBASIC3.15□□□□□ -1.91
CCL1P22362 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.15□□□□□ -1.91
CCL1P22362 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL1P22362 Z82195.1-201ENST00000604558 398 ntBASIC3.15□□□□□ -1.91
CCL1P22362 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCL1P22362 AL590392.1-201ENST00000604960 446 ntBASIC3.15□□□□□ -1.91
CCL1P22362 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL1P22362 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCL1P22362 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL1P22362 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCL1P22362 U7.8-201ENST00000619968 63 ntBASIC3.15□□□□□ -1.91
CCL1P22362 MIR6758-201ENST00000620653 63 ntBASIC3.15□□□□□ -1.91
CCL1P22362 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCL1P22362 AL354798.1-201ENST00000622505 329 ntBASIC3.15□□□□□ -1.91
CCL1P22362 C2orf27A-204ENST00000623058 969 ntBASIC3.15□□□□□ -1.91
CCL1P22362 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL1P22362 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL1P22362 DCAF13P3-201ENST00000561147 1334 ntBASIC3.15□□□□□ -1.91
CCL1P22362 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCL1P22362 AP004289.2-201ENST00000444413 1457 ntBASIC3.15□□□□□ -1.91
CCL1P22362 AC106871.1-201ENST00000568324 3102 ntBASIC3.15□□□□□ -1.91
CCL1P22362 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL1P22362 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.14□□□□□ -1.91
CCL1P22362 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCL1P22362 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL1P22362 AC073073.2-201ENST00000609827 2578 ntBASIC3.14□□□□□ -1.91
CCL1P22362 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.14□□□□□ -1.91
CCL1P22362 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCL1P22362 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL1P22362 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL1P22362 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL1P22362 AL049693.1-201ENST00000402760 611 ntBASIC3.14□□□□□ -1.91
CCL1P22362 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL1P22362 BTF3P9-201ENST00000418784 283 ntBASIC3.14□□□□□ -1.91
CCL1P22362 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.14□□□□□ -1.91
CCL1P22362 RPS12P23-201ENST00000419579 400 ntBASIC3.14□□□□□ -1.91
CCL1P22362 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL1P22362 AL139247.1-201ENST00000422768 325 ntBASIC3.14□□□□□ -1.91
CCL1P22362 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms