Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC012020.1-201ENST00000624541 1728 ntBASIC4.28□□□□□ -1.72
HLA-DPA1P20036 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DPA1P20036 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 RNA5SP167-201ENST00000365461 116 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 RNA5SP36-201ENST00000410197 133 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 RPL17P35-201ENST00000432217 549 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 HMGN2P21-201ENST00000447764 270 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 RPS23P7-201ENST00000466210 444 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC109327.1-201ENST00000471666 403 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 RPS29P19-201ENST00000479709 171 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 GAPDHP36-201ENST00000480688 918 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC008958.1-201ENST00000511047 682 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 FTH1P9-201ENST00000513251 355 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC016065.2-201ENST00000514530 444 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 RNA5SP49-201ENST00000516450 115 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 RNA5SP519-201ENST00000516480 119 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 IGHV3-32-201ENST00000519182 355 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC134698.5-201ENST00000519444 336 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 PSMB7P1-201ENST00000556349 514 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 EIF5A2P1-201ENST00000564027 460 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC023575.1-201ENST00000580510 358 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 MIR432-201ENST00000606207 94 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 MIR6810-201ENST00000622701 70 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC011944.2-201ENST00000624440 683 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC138649.5-201ENST00000637456 137 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DPA1P20036 MTND5P28-201ENST00000438005 1594 ntBASIC4.27□□□□□ -1.73
HLA-DPA1P20036 AC018529.3-201ENST00000624212 2254 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 FAM3C2-201ENST00000312214 681 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 RNU1-94P-201ENST00000362627 173 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 RNU6-1243P-201ENST00000364028 107 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 RNU1-132P-201ENST00000364300 164 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AL355379.1-201ENST00000405542 640 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 NRBF2P2-201ENST00000413087 861 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 CHIAP3-201ENST00000423668 1133 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 GTF2IP2-201ENST00000424290 697 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 RPL36P19-201ENST00000430744 301 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 RPL23AP46-201ENST00000438548 490 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 RPL23AP89-201ENST00000439324 255 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 RAD23BP3-201ENST00000454157 1152 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC078857.1-201ENST00000469870 667 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 RPS27P23-201ENST00000487608 251 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 PPM1AP1-201ENST00000502740 1135 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 OR5H3P-201ENST00000502817 919 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC112518.2-201ENST00000508565 425 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC106806.2-201ENST00000509365 500 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 KCTD9P2-201ENST00000512203 1013 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC027338.1-201ENST00000514840 825 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 HIGD1AP3-201ENST00000515857 278 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 RNU6-202P-201ENST00000515998 96 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 KPNA2P3-201ENST00000584190 848 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC021851.1-201ENST00000608537 1082 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 MLECP1-201ENST00000615893 709 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AL158196.1-201ENST00000616786 434 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 AC006338.2-201ENST00000616864 791 ntBASIC4.26□□□□□ -1.73
HLA-DPA1P20036 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPA1P20036 MTCO1P6-201ENST00000481192 1384 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms