Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 RPS3AP36-201ENST00000398190 775 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 RN7SKP266-201ENST00000410232 287 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 MTCO1P17-201ENST00000411522 491 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 RPS15AP40-201ENST00000419621 391 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 CYCSP6-201ENST00000434498 302 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 RPL12P46-201ENST00000436610 195 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 AC096775.1-201ENST00000437724 448 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 RPL7P36-201ENST00000444633 681 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC3P19447 AC104073.1-201ENST00000451988 151 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.48□□□□□ -1.37
ERCC3P19447 TRBV5-2-201ENST00000489095 273 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 AC110775.1-201ENST00000513721 462 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 AC108064.1-201ENST00000513791 460 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC3P19447 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC3P19447 AC136777.2-201ENST00000522979 358 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC3P19447 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC3P19447 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC3P19447 AL049779.2-201ENST00000553847 315 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 AL049779.3-201ENST00000557141 606 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC3P19447 AC012616.1-201ENST00000600294 197 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC3P19447 AC091834.1-201ENST00000614543 472 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.48□□□□□ -1.37
ERCC3P19447 OR5AK4P-201ENST00000635912 903 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 AL078621.3-201ENST00000623707 2042 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
ERCC3P19447 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.48□□□□□ -1.37
ERCC3P19447 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC3P19447 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 AC138907.8-201ENST00000623981 2256 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
ERCC3P19447 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 MFSD8-239ENST00000641590 2479 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC3P19447 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC3P19447 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC3P19447 Z97055.1-201ENST00000419730 712 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.47□□□□□ -1.37
ERCC3P19447 AL513174.1-201ENST00000423182 629 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 RPL12P34-201ENST00000424532 479 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.47□□□□□ -1.37
ERCC3P19447 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC3P19447 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC3P19447 RPS23P2-201ENST00000463671 415 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 RPL31P50-201ENST00000471002 296 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 DUTP1-201ENST00000493631 470 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 AC072052.1-201ENST00000496556 306 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC3P19447 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.47□□□□□ -1.37
ERCC3P19447 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 HSPA8P13-201ENST00000523715 472 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.47□□□□□ -1.37
ERCC3P19447 AC107918.3-201ENST00000533272 382 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC3P19447 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 MIR3913-1-201ENST00000577744 102 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 AC091965.4-201ENST00000607691 587 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 AL118522.2-201ENST00000616045 615 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.47□□□□□ -1.37
ERCC3P19447 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
ERCC3P19447 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 AC130650.2-201ENST00000618736 2403 ntBASIC6.47□□□□□ -1.37
ERCC3P19447 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC3P19447 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC3P19447 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
ERCC3P19447 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.46□□□□□ -1.37
ERCC3P19447 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.46□□□□□ -1.37
ERCC3P19447 LINC01963-201ENST00000562038 3148 ntBASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms