Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.78□□□□□ -1.8
SDC1P18827 AL356276.2-201ENST00000435919 558 ntBASIC3.78□□□□□ -1.8
SDC1P18827 RPL7P28-201ENST00000437739 740 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AC068135.1-201ENST00000446164 246 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AL096829.2-201ENST00000446582 742 ntBASIC3.78□□□□□ -1.8
SDC1P18827 PPIAP21-201ENST00000464473 501 ntBASIC3.78□□□□□ -1.8
SDC1P18827 RN7SL860P-201ENST00000473738 223 ntBASIC3.78□□□□□ -1.8
SDC1P18827 TRBV8-2-201ENST00000475637 270 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AL132838.2-201ENST00000492041 314 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AL035404.1-201ENST00000497982 568 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AC010342.1-201ENST00000514047 877 ntBASIC3.78□□□□□ -1.8
SDC1P18827 HMGB1P23-201ENST00000518743 568 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.78□□□□□ -1.8
SDC1P18827 AC083923.1-201ENST00000523708 376 ntBASIC3.78□□□□□ -1.8
SDC1P18827 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.78□□□□□ -1.8
SDC1P18827 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.78□□□□□ -1.8
SDC1P18827 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.78□□□□□ -1.8
SDC1P18827 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.78□□□□□ -1.8
SDC1P18827 MIR3908-201ENST00000579798 126 ntBASIC3.78□□□□□ -1.8
SDC1P18827 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.78□□□□□ -1.8
SDC1P18827 ARF4P1-201ENST00000605447 541 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AC112503.2-201ENST00000609005 552 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AC009318.3-201ENST00000616916 503 ntBASIC3.78□□□□□ -1.8
SDC1P18827 STMN1P1-201ENST00000617809 440 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AC073569.3-201ENST00000619055 682 ntBASIC3.78□□□□□ -1.8
SDC1P18827 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.78□□□□□ -1.8
SDC1P18827 AP002371.2-201ENST00000624450 503 ntBASIC3.78□□□□□ -1.8
SDC1P18827 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
SDC1P18827 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SDC1P18827 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SDC1P18827 Z73965.1-201ENST00000623412 2297 ntBASIC3.78□□□□□ -1.8
SDC1P18827 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
SDC1P18827 AC114546.3-201ENST00000623582 1734 ntBASIC3.78□□□□□ -1.8
SDC1P18827 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SDC1P18827 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
SDC1P18827 AL592437.2-201ENST00000421655 2434 ntBASIC3.78□□□□□ -1.81
SDC1P18827 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SDC1P18827 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SDC1P18827 ENSAP3-201ENST00000312710 333 ntBASIC3.77□□□□□ -1.81
SDC1P18827 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SDC1P18827 RNU1-32P-201ENST00000363937 159 ntBASIC3.77□□□□□ -1.81
SDC1P18827 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 MIR3074-201ENST00000384885 81 ntBASIC3.77□□□□□ -1.81
SDC1P18827 OR6C69P-201ENST00000394268 893 ntBASIC3.77□□□□□ -1.81
SDC1P18827 RPL22P22-201ENST00000395439 379 ntBASIC3.77□□□□□ -1.81
SDC1P18827 RPL37P18-201ENST00000411602 243 ntBASIC3.77□□□□□ -1.81
SDC1P18827 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.77□□□□□ -1.81
SDC1P18827 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.77□□□□□ -1.81
SDC1P18827 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 AC093422.3-201ENST00000428506 305 ntBASIC3.77□□□□□ -1.81
SDC1P18827 AC073143.1-201ENST00000436316 395 ntBASIC3.77□□□□□ -1.81
SDC1P18827 CEACAMP9-201ENST00000442990 513 ntBASIC3.77□□□□□ -1.81
SDC1P18827 AL500522.2-201ENST00000448562 343 ntBASIC3.77□□□□□ -1.81
SDC1P18827 RPS17P13-201ENST00000448974 407 ntBASIC3.77□□□□□ -1.81
SDC1P18827 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.77□□□□□ -1.81
SDC1P18827 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 IFNWP4-201ENST00000453148 294 ntBASIC3.77□□□□□ -1.81
SDC1P18827 SBDSP1-204ENST00000453858 737 ntBASIC3.77□□□□□ -1.81
SDC1P18827 AC008379.1-201ENST00000463655 464 ntBASIC3.77□□□□□ -1.81
SDC1P18827 AC008565.1-201ENST00000509046 885 ntBASIC3.77□□□□□ -1.81
SDC1P18827 AC018797.3-201ENST00000513388 1241 ntBASIC3.77□□□□□ -1.81
SDC1P18827 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.77□□□□□ -1.81
SDC1P18827 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.77□□□□□ -1.81
SDC1P18827 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.77□□□□□ -1.81
SDC1P18827 CYCSP29-201ENST00000533731 318 ntBASIC3.77□□□□□ -1.81
SDC1P18827 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.77□□□□□ -1.81
SDC1P18827 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.77□□□□□ -1.81
SDC1P18827 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.77□□□□□ -1.81
SDC1P18827 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.77□□□□□ -1.81
SDC1P18827 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.77□□□□□ -1.81
SDC1P18827 HNRNPCP4-201ENST00000571636 900 ntBASIC3.77□□□□□ -1.81
SDC1P18827 RN7SL622P-201ENST00000585292 275 ntBASIC3.77□□□□□ -1.81
SDC1P18827 VN1R84P-201ENST00000593697 235 ntBASIC3.77□□□□□ -1.81
SDC1P18827 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.77□□□□□ -1.81
SDC1P18827 AP005229.2-201ENST00000609980 697 ntBASIC3.77□□□□□ -1.81
SDC1P18827 MIR486-1-201ENST00000612171 68 ntBASIC3.77□□□□□ -1.81
SDC1P18827 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.77□□□□□ -1.81
SDC1P18827 AC068880.4-201ENST00000623082 495 ntBASIC3.77□□□□□ -1.81
SDC1P18827 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.77□□□□□ -1.81
SDC1P18827 AC132825.7-201ENST00000638744 335 ntBASIC3.77□□□□□ -1.81
SDC1P18827 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
SDC1P18827 AL049555.1-201ENST00000562834 1933 ntBASIC3.77□□□□□ -1.81
SDC1P18827 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.77□□□□□ -1.81
SDC1P18827 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.77□□□□□ -1.81
SDC1P18827 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SDC1P18827 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.76□□□□□ -1.81
SDC1P18827 AC007390.2-201ENST00000606229 3803 ntBASIC3.76□□□□□ -1.81
SDC1P18827 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
SDC1P18827 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SDC1P18827 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SDC1P18827 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SDC1P18827 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SDC1P18827 AC022893.2-201ENST00000564832 3296 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms