Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.26□□□□□ -1.89
CTLA4P16410 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CTLA4P16410 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTLA4P16410 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.26□□□□□ -1.89
CTLA4P16410 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTLA4P16410 MTCO1P14-201ENST00000441695 1559 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.25□□□□□ -1.89
CTLA4P16410 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.25□□□□□ -1.89
CTLA4P16410 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTLA4P16410 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTLA4P16410 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.25□□□□□ -1.89
CTLA4P16410 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CTLA4P16410 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.25□□□□□ -1.89
CTLA4P16410 XIAPP3-201ENST00000312918 795 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 RPL7P60-201ENST00000397636 735 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.25□□□□□ -1.89
CTLA4P16410 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.25□□□□□ -1.89
CTLA4P16410 AC091390.1-201ENST00000433904 331 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.25□□□□□ -1.89
CTLA4P16410 RPL7P28-201ENST00000437739 740 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 AL157884.3-201ENST00000448273 1184 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.25□□□□□ -1.89
CTLA4P16410 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.25□□□□□ -1.89
CTLA4P16410 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.25□□□□□ -1.89
CTLA4P16410 IGLVIV-53-201ENST00000520107 367 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.25□□□□□ -1.89
CTLA4P16410 AC023161.2-201ENST00000551218 780 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.25□□□□□ -1.89
CTLA4P16410 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.25□□□□□ -1.89
CTLA4P16410 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.25□□□□□ -1.89
CTLA4P16410 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.25□□□□□ -1.89
CTLA4P16410 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.25□□□□□ -1.89
CTLA4P16410 BMS1P7-201ENST00000602440 1052 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 AC083899.3-201ENST00000603413 594 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 AC020910.2-201ENST00000603635 610 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 AC067959.1-201ENST00000604334 379 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 RNU1-30P-201ENST00000606575 163 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 AL590410.1-201ENST00000617925 333 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 RPL23AP61-201ENST00000623642 466 ntBASIC3.25□□□□□ -1.89
CTLA4P16410 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.25□□□□□ -1.89
CTLA4P16410 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.25□□□□□ -1.89
CTLA4P16410 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.25□□□□□ -1.89
CTLA4P16410 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTLA4P16410 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTLA4P16410 AC095050.2-201ENST00000510748 1458 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTLA4P16410 OR4A15-201ENST00000314706 1035 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 SNORA62.2-201ENST00000364672 152 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.24□□□□□ -1.89
CTLA4P16410 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.24□□□□□ -1.89
CTLA4P16410 MIR3074-201ENST00000384885 81 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CTLA4P16410 MTHFD2P2-201ENST00000407725 247 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.24□□□□□ -1.89
CTLA4P16410 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.24□□□□□ -1.89
CTLA4P16410 AC002075.2-201ENST00000425207 252 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AL392003.1-201ENST00000434394 243 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.24□□□□□ -1.89
CTLA4P16410 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.24□□□□□ -1.89
CTLA4P16410 RPS29P7-201ENST00000439662 171 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.24□□□□□ -1.89
CTLA4P16410 RPS29P31-201ENST00000446147 164 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AL133162.1-201ENST00000463228 453 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 RPS20P21-201ENST00000466859 343 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AC103987.1-201ENST00000473394 348 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 GAPDHP36-201ENST00000480688 918 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 RPS3AP50-201ENST00000487064 803 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.24□□□□□ -1.89
CTLA4P16410 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.24□□□□□ -1.89
CTLA4P16410 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.24□□□□□ -1.89
CTLA4P16410 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.24□□□□□ -1.89
CTLA4P16410 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.24□□□□□ -1.89
CTLA4P16410 AC027281.1-201ENST00000574178 758 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 MIR5187-201ENST00000583479 76 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.24□□□□□ -1.89
CTLA4P16410 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.24□□□□□ -1.89
CTLA4P16410 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.24□□□□□ -1.89
CTLA4P16410 AC115621.1-201ENST00000604653 858 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.24□□□□□ -1.89
CTLA4P16410 AL732618.1-201ENST00000623251 301 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AP003072.4-201ENST00000624580 310 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AC068724.3-201ENST00000625906 87 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AL732372.2-225ENST00000642124 456 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CTLA4P16410 AC007656.2-201ENST00000624902 4547 ntBASIC3.24□□□□□ -1.89
CTLA4P16410 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.24□□□□□ -1.89
CTLA4P16410 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTLA4P16410 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTLA4P16410 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CTLA4P16410 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.23□□□□□ -1.89
CTLA4P16410 AC100871.1-201ENST00000507871 1456 ntBASIC3.23□□□□□ -1.89
CTLA4P16410 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.23□□□□□ -1.89
CTLA4P16410 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CTLA4P16410 RNA5SP42-201ENST00000364278 115 ntBASIC3.23□□□□□ -1.89
CTLA4P16410 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTLA4P16410 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.23□□□□□ -1.89
CTLA4P16410 RNU6-532P-201ENST00000384318 107 ntBASIC3.23□□□□□ -1.89
CTLA4P16410 RPL32P23-201ENST00000397237 405 ntBASIC3.23□□□□□ -1.89
CTLA4P16410 RN7SKP156-201ENST00000410308 342 ntBASIC3.23□□□□□ -1.89
CTLA4P16410 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms