Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC006386.2-201ENST00000624491 75 ntBASIC5.93□□□□□ -1.46
TOP2AP11388 AC012005.1-201ENST00000624575 75 ntBASIC5.93□□□□□ -1.46
TOP2AP11388 AC063952.1-203ENST00000634410 658 ntBASIC5.93□□□□□ -1.46
TOP2AP11388 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TOP2AP11388 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.92□□□□□ -1.46
TOP2AP11388 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.92□□□□□ -1.46
TOP2AP11388 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.92□□□□□ -1.46
TOP2AP11388 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TOP2AP11388 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.92□□□□□ -1.46
TOP2AP11388 Y_RNA.500-201ENST00000384466 111 ntBASIC5.92□□□□□ -1.46
TOP2AP11388 AC093719.1-202ENST00000392735 373 ntBASIC5.92□□□□□ -1.46
TOP2AP11388 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TOP2AP11388 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.92□□□□□ -1.46
TOP2AP11388 AC107083.1-201ENST00000439643 279 ntBASIC5.92□□□□□ -1.46
TOP2AP11388 RN7SL863P-201ENST00000462370 296 ntBASIC5.92□□□□□ -1.46
TOP2AP11388 AC026333.2-201ENST00000542164 106 ntBASIC5.92□□□□□ -1.46
TOP2AP11388 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.92□□□□□ -1.46
TOP2AP11388 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.92□□□□□ -1.46
TOP2AP11388 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TOP2AP11388 AC093732.2-201ENST00000607950 274 ntBASIC5.92□□□□□ -1.46
TOP2AP11388 OR6C71P-202ENST00000641886 1107 ntBASIC5.92□□□□□ -1.46
TOP2AP11388 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TOP2AP11388 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
TOP2AP11388 AL158071.1-201ENST00000430315 461 ntBASIC5.91□□□□□ -1.46
TOP2AP11388 KATNBL1P2-201ENST00000433311 835 ntBASIC5.91□□□□□ -1.46
TOP2AP11388 MRPS18BP2-201ENST00000434310 759 ntBASIC5.91□□□□□ -1.46
TOP2AP11388 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.91□□□□□ -1.46
TOP2AP11388 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.91□□□□□ -1.46
TOP2AP11388 RPL5P30-201ENST00000465511 891 ntBASIC5.91□□□□□ -1.46
TOP2AP11388 AC069499.1-201ENST00000489433 509 ntBASIC5.91□□□□□ -1.46
TOP2AP11388 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.91□□□□□ -1.46
TOP2AP11388 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.91□□□□□ -1.46
TOP2AP11388 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.91□□□□□ -1.46
TOP2AP11388 MIR486-1-201ENST00000612171 68 ntBASIC5.91□□□□□ -1.46
TOP2AP11388 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TOP2AP11388 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TOP2AP11388 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TOP2AP11388 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TOP2AP11388 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TOP2AP11388 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TOP2AP11388 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TOP2AP11388 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
TOP2AP11388 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TOP2AP11388 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.9□□□□□ -1.46
TOP2AP11388 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.9□□□□□ -1.46
TOP2AP11388 OR5AP1P-201ENST00000529730 940 ntBASIC5.9□□□□□ -1.46
TOP2AP11388 AC010680.3-201ENST00000604215 520 ntBASIC5.9□□□□□ -1.46
TOP2AP11388 AL162274.2-201ENST00000614406 332 ntBASIC5.9□□□□□ -1.46
TOP2AP11388 AC233309.1-201ENST00000619522 751 ntBASIC5.9□□□□□ -1.46
TOP2AP11388 SNORD39.4-201ENST00000620099 78 ntBASIC5.9□□□□□ -1.46
TOP2AP11388 SCARNA15.3-201ENST00000626315 122 ntBASIC5.9□□□□□ -1.46
TOP2AP11388 SCARNA4.1-201ENST00000628597 123 ntBASIC5.9□□□□□ -1.46
TOP2AP11388 AL022322.2-201ENST00000624072 20397 ntBASIC5.9□□□□□ -1.46
TOP2AP11388 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.9□□□□□ -1.46
TOP2AP11388 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TOP2AP11388 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TOP2AP11388 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.9□□□□□ -1.47
TOP2AP11388 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.9□□□□□ -1.47
TOP2AP11388 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.9□□□□□ -1.47
TOP2AP11388 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
TOP2AP11388 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
TOP2AP11388 ZNF807-201ENST00000328088 1707 ntBASIC5.9□□□□□ -1.47
TOP2AP11388 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TOP2AP11388 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.89□□□□□ -1.47
TOP2AP11388 AL356535.1-201ENST00000440335 398 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP2AP11388 APOOP4-201ENST00000513530 597 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 CR383656.14-201ENST00000551951 406 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TOP2AP11388 MIR4513-201ENST00000581077 86 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 MTCO3P22-201ENST00000603219 784 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP2AP11388 AL158062.1-201ENST00000619632 745 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TOP2AP11388 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
TOP2AP11388 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.89□□□□□ -1.47
TOP2AP11388 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.89□□□□□ -1.47
TOP2AP11388 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TOP2AP11388 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TOP2AP11388 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.89□□□□□ -1.47
TOP2AP11388 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP2AP11388 HSPE1P8-201ENST00000406997 288 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 AC093698.1-201ENST00000423843 571 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 RNF19BPX-201ENST00000426224 625 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 RPL7P48-201ENST00000461513 746 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP2AP11388 LSM1P2-201ENST00000604911 322 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP2AP11388 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.89□□□□□ -1.47
TOP2AP11388 ATP5A1P2-202ENST00000616464 443 ntBASIC5.89□□□□□ -1.47
TOP2AP11388 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
TOP2AP11388 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOP2AP11388 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.88□□□□□ -1.47
TOP2AP11388 AC068647.1-201ENST00000489539 2265 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
TOP2AP11388 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOP2AP11388 SNORA80A-201ENST00000363922 136 ntBASIC5.88□□□□□ -1.47
TOP2AP11388 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TOP2AP11388 HMGN2P8-201ENST00000391458 268 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms