Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBCP0CG48 AC004923.2-201ENST00000529649 369 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.52□□□□□ -1.85
UBCP0CG48 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.52□□□□□ -1.85
UBCP0CG48 AC007687.1-201ENST00000602704 304 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 NTAN1P1-201ENST00000603150 646 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 AC016911.1-201ENST00000613297 452 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 AC124312.6-202ENST00000623624 418 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 MIR4496-201ENST00000635896 61 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.52□□□□□ -1.85
UBCP0CG48 FAM157B-203ENST00000639350 358 ntBASIC3.52□□□□□ -1.85
UBCP0CG48 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
UBCP0CG48 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBCP0CG48 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBCP0CG48 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBCP0CG48 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.51□□□□□ -1.85
UBCP0CG48 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBCP0CG48 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBCP0CG48 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
UBCP0CG48 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
UBCP0CG48 RNU6-1293P-201ENST00000384077 107 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 RNU6-398P-201ENST00000384143 109 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 MIR1303-201ENST00000408625 86 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 CHIAP3-201ENST00000423668 1133 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.51□□□□□ -1.85
UBCP0CG48 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBCP0CG48 HMGB1P48-201ENST00000446155 598 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 AC092685.1-201ENST00000447960 1243 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 AL500522.2-201ENST00000448562 343 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 MTCO3P16-201ENST00000454456 754 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 MTCO3P20-201ENST00000454926 688 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.51□□□□□ -1.85
UBCP0CG48 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.51□□□□□ -1.85
UBCP0CG48 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.51□□□□□ -1.85
UBCP0CG48 AC023141.12-201ENST00000512399 199 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 AC026726.1-201ENST00000512859 601 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.51□□□□□ -1.85
UBCP0CG48 RN7SKP277-201ENST00000516895 283 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.51□□□□□ -1.85
UBCP0CG48 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.51□□□□□ -1.85
UBCP0CG48 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.51□□□□□ -1.85
UBCP0CG48 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
UBCP0CG48 AC103710.3-201ENST00000608157 948 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.51□□□□□ -1.85
UBCP0CG48 Mico1.1-201ENST00000611698 204 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 MIR7151-201ENST00000617477 60 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.51□□□□□ -1.85
UBCP0CG48 RNU6-156P-201ENST00000621869 107 ntBASIC3.51□□□□□ -1.85
UBCP0CG48 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.51□□□□□ -1.85
UBCP0CG48 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.51□□□□□ -1.85
UBCP0CG48 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
UBCP0CG48 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.51□□□□□ -1.85
UBCP0CG48 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.51□□□□□ -1.85
UBCP0CG48 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBCP0CG48 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBCP0CG48 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
UBCP0CG48 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
UBCP0CG48 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBCP0CG48 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBCP0CG48 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBCP0CG48 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBCP0CG48 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.5□□□□□ -1.85
UBCP0CG48 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
UBCP0CG48 MIR192-201ENST00000384915 110 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 HMGB3P19-201ENST00000403971 560 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 RPS4XP9-201ENST00000405151 780 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 VTA1P1-201ENST00000414044 866 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 RPS15AP40-201ENST00000419621 391 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 OR4F13P-201ENST00000428478 931 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.5□□□□□ -1.85
UBCP0CG48 CBX1P1-201ENST00000440184 427 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBCP0CG48 RPS4XP4-201ENST00000443195 763 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.5□□□□□ -1.85
UBCP0CG48 RN7SL303P-201ENST00000469773 251 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 RN7SL481P-201ENST00000477764 299 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 TMED11P-201ENST00000479478 690 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 OR9N1P-202ENST00000494289 481 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.5□□□□□ -1.85
UBCP0CG48 AL035404.1-201ENST00000497982 568 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.5□□□□□ -1.85
UBCP0CG48 AC093720.1-201ENST00000505681 714 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.5□□□□□ -1.85
UBCP0CG48 RN7SKP283-201ENST00000517197 270 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 MTND2P26-201ENST00000528255 1029 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBCP0CG48 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.5□□□□□ -1.85
UBCP0CG48 AC068831.4-201ENST00000556118 109 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 PSMB7P1-201ENST00000556349 514 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.5□□□□□ -1.85
UBCP0CG48 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.5□□□□□ -1.85
UBCP0CG48 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.5□□□□□ -1.85
UBCP0CG48 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBCP0CG48 EIF1P6-201ENST00000600054 334 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 AC018618.2-201ENST00000604770 446 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.5□□□□□ -1.85
UBCP0CG48 MIR7703-201ENST00000620784 77 ntBASIC3.5□□□□□ -1.85
UBCP0CG48 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.5□□□□□ -1.85
UBCP0CG48 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.5□□□□□ -1.85
UBCP0CG48 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms