Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DOAP06340 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DOAP06340 AC011503.2-201ENST00000594230 1500 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC073055.1-201ENST00000456901 1621 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 RNU4-7P-201ENST00000364758 141 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 Y_RNA.553-201ENST00000384670 102 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 RPS27AP11-201ENST00000402798 447 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 AL079342.2-201ENST00000403367 482 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 TMSB10P2-201ENST00000416049 131 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 NPM1P11-201ENST00000417106 855 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 RSL24D1P6-201ENST00000426934 401 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 AP001324.1-201ENST00000428553 399 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 RPL12P26-201ENST00000452430 487 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 CDC42P1-201ENST00000456658 548 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 PPIAP21-201ENST00000464473 501 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC011979.1-201ENST00000472300 483 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 RN7SL810P-201ENST00000493031 276 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC104090.1-201ENST00000506341 1171 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 PRELID3BP4-201ENST00000515476 571 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC011260.1-201ENST00000578420 472 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC125494.2-201ENST00000602431 657 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC011944.2-201ENST00000624440 683 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC006065.6-201ENST00000625201 545 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.38□□□□□ -1.55
HLA-DOAP06340 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-DOAP06340 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DOAP06340 CCT8P1-201ENST00000413611 1657 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DOAP06340 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DOAP06340 OR56B2P-201ENST00000317102 954 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 RNU5A-2P-201ENST00000384337 116 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC022028.1-201ENST00000412054 408 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 UBE2V1P10-201ENST00000414685 269 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 OR6C64P-201ENST00000419708 825 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 MTCO1P52-201ENST00000433928 531 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 FTH1P16-201ENST00000435241 552 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 HMGB1P45-201ENST00000435986 653 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 YWHAZP7-201ENST00000436906 631 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 RPL23AP76-201ENST00000441860 458 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 MTCYBP3-201ENST00000445588 1137 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AL606662.1-201ENST00000445763 553 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 HMGB1P48-201ENST00000446155 598 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 FTH1P2-201ENST00000466086 412 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DOAP06340 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 HMGB3P13-201ENST00000511263 607 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC011352.1-201ENST00000512300 793 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC008837.2-201ENST00000513076 418 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC022447.1-201ENST00000515358 464 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 RNU6-1004P-201ENST00000516584 111 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 NDUFA5P2-201ENST00000519723 344 ntBASIC5.37□□□□□ -1.55
HLA-DOAP06340 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DOAP06340 AC025260.1-201ENST00000548858 430 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms