Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.32□□□□□ -1.88
CD74P04233 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
CD74P04233 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.32□□□□□ -1.88
CD74P04233 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CD74P04233 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.31□□□□□ -1.88
CD74P04233 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CD74P04233 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD74P04233 SEPT7P7-201ENST00000420492 1301 ntBASIC3.31□□□□□ -1.88
CD74P04233 OR5T3-201ENST00000303059 1023 ntBASIC3.31□□□□□ -1.88
CD74P04233 OR4K17-201ENST00000315543 1032 ntBASIC3.31□□□□□ -1.88
CD74P04233 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD74P04233 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD74P04233 RNU6-31P-201ENST00000384388 108 ntBASIC3.31□□□□□ -1.88
CD74P04233 RNU6-328P-201ENST00000390887 106 ntBASIC3.31□□□□□ -1.88
CD74P04233 RNU6-244P-201ENST00000391028 104 ntBASIC3.31□□□□□ -1.88
CD74P04233 AL391417.1-201ENST00000404100 426 ntBASIC3.31□□□□□ -1.88
CD74P04233 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.31□□□□□ -1.88
CD74P04233 RPS27AP7-201ENST00000422792 455 ntBASIC3.31□□□□□ -1.88
CD74P04233 RPL18P10-201ENST00000425606 538 ntBASIC3.31□□□□□ -1.88
CD74P04233 C4BPAP2-201ENST00000428434 478 ntBASIC3.31□□□□□ -1.88
CD74P04233 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.31□□□□□ -1.88
CD74P04233 HIGD1AP4-201ENST00000430194 280 ntBASIC3.31□□□□□ -1.88
CD74P04233 AC016712.1-201ENST00000431088 378 ntBASIC3.31□□□□□ -1.88
CD74P04233 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.31□□□□□ -1.88
CD74P04233 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.31□□□□□ -1.88
CD74P04233 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.31□□□□□ -1.88
CD74P04233 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.31□□□□□ -1.88
CD74P04233 AC023512.1-201ENST00000444513 499 ntBASIC3.31□□□□□ -1.88
CD74P04233 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.31□□□□□ -1.88
CD74P04233 TPT1P12-201ENST00000448968 492 ntBASIC3.31□□□□□ -1.88
CD74P04233 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.31□□□□□ -1.88
CD74P04233 NANOGP10-201ENST00000453325 895 ntBASIC3.31□□□□□ -1.88
CD74P04233 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.31□□□□□ -1.88
CD74P04233 snoU13.1-201ENST00000459157 104 ntBASIC3.31□□□□□ -1.88
CD74P04233 AC004801.2-202ENST00000463559 283 ntBASIC3.31□□□□□ -1.88
CD74P04233 RPL7L1P8-201ENST00000469911 741 ntBASIC3.31□□□□□ -1.88
CD74P04233 AC016550.3-201ENST00000515706 767 ntBASIC3.31□□□□□ -1.88
CD74P04233 RNU6-1308P-201ENST00000516817 103 ntBASIC3.31□□□□□ -1.88
CD74P04233 RNU6-889P-201ENST00000517189 103 ntBASIC3.31□□□□□ -1.88
CD74P04233 RN7SKP92-201ENST00000517266 244 ntBASIC3.31□□□□□ -1.88
CD74P04233 IGLVIV-65-201ENST00000517313 360 ntBASIC3.31□□□□□ -1.88
CD74P04233 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.31□□□□□ -1.88
CD74P04233 SUMO2P20-201ENST00000520803 283 ntBASIC3.31□□□□□ -1.88
CD74P04233 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.31□□□□□ -1.88
CD74P04233 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.31□□□□□ -1.88
CD74P04233 AC007687.1-201ENST00000602704 304 ntBASIC3.31□□□□□ -1.88
CD74P04233 KATNBL1P1-201ENST00000605192 748 ntBASIC3.31□□□□□ -1.88
CD74P04233 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.31□□□□□ -1.88
CD74P04233 AC008121.2-201ENST00000614647 523 ntBASIC3.31□□□□□ -1.88
CD74P04233 AC022079.2-201ENST00000619739 566 ntBASIC3.31□□□□□ -1.88
CD74P04233 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.31□□□□□ -1.88
CD74P04233 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.31□□□□□ -1.88
CD74P04233 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.31□□□□□ -1.88
CD74P04233 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD74P04233 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD74P04233 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.31□□□□□ -1.88
CD74P04233 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD74P04233 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD74P04233 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 GABPAP-201ENST00000419271 1356 ntBASIC3.3□□□□□ -1.88
CD74P04233 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 SNORA62-201ENST00000365493 153 ntBASIC3.3□□□□□ -1.88
CD74P04233 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.3□□□□□ -1.88
CD74P04233 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 MIR129-1-201ENST00000384972 72 ntBASIC3.3□□□□□ -1.88
CD74P04233 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 NPM1P10-201ENST00000398310 865 ntBASIC3.3□□□□□ -1.88
CD74P04233 CCNB2P1-201ENST00000399411 1150 ntBASIC3.3□□□□□ -1.88
CD74P04233 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 AC009480.2-201ENST00000422916 432 ntBASIC3.3□□□□□ -1.88
CD74P04233 AC092017.2-201ENST00000427600 362 ntBASIC3.3□□□□□ -1.88
CD74P04233 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD74P04233 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.3□□□□□ -1.88
CD74P04233 AC023347.2-201ENST00000433994 462 ntBASIC3.3□□□□□ -1.88
CD74P04233 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CD74P04233 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.3□□□□□ -1.88
CD74P04233 AC245517.2-201ENST00000442890 346 ntBASIC3.3□□□□□ -1.88
CD74P04233 RPS29P31-201ENST00000446147 164 ntBASIC3.3□□□□□ -1.88
CD74P04233 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.3□□□□□ -1.88
CD74P04233 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.3□□□□□ -1.88
CD74P04233 CFTRP1-201ENST00000456646 183 ntBASIC3.3□□□□□ -1.88
CD74P04233 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.3□□□□□ -1.88
CD74P04233 RPL30P11-201ENST00000495304 339 ntBASIC3.3□□□□□ -1.88
CD74P04233 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.3□□□□□ -1.88
CD74P04233 RPL5P23-201ENST00000496040 868 ntBASIC3.3□□□□□ -1.88
CD74P04233 AK3P4-201ENST00000504283 583 ntBASIC3.3□□□□□ -1.88
CD74P04233 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.3□□□□□ -1.88
CD74P04233 AC093720.1-201ENST00000505681 714 ntBASIC3.3□□□□□ -1.88
CD74P04233 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.3□□□□□ -1.88
CD74P04233 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.3□□□□□ -1.88
CD74P04233 MTCO1P30-201ENST00000515244 580 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms