Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 U3.19-201ENST00000390893 196 ntBASIC2.11□□□□□ -2.07
APOBP04114 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.11□□□□□ -2.07
APOBP04114 AL691447.1-201ENST00000419456 387 ntBASIC2.11□□□□□ -2.07
APOBP04114 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC2.11□□□□□ -2.07
APOBP04114 AC117440.1-201ENST00000474107 571 ntBASIC2.11□□□□□ -2.07
APOBP04114 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
APOBP04114 RPS29P26-201ENST00000477483 171 ntBASIC2.11□□□□□ -2.07
APOBP04114 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
APOBP04114 AC005242.1-201ENST00000585658 438 ntBASIC2.11□□□□□ -2.07
APOBP04114 MIR7154-201ENST00000620673 73 ntBASIC2.11□□□□□ -2.07
APOBP04114 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC2.11□□□□□ -2.07
APOBP04114 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.11□□□□□ -2.07
APOBP04114 UBE3AP2-201ENST00000429033 2259 ntBASIC2.11□□□□□ -2.07
APOBP04114 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 GSTM3P2-201ENST00000412746 530 ntBASIC2.11□□□□□ -2.07
APOBP04114 AC021678.1-201ENST00000505195 936 ntBASIC2.11□□□□□ -2.07
APOBP04114 AC109458.1-201ENST00000508858 316 ntBASIC2.11□□□□□ -2.07
APOBP04114 AL121594.4-201ENST00000556211 1196 ntBASIC2.11□□□□□ -2.07
APOBP04114 OR51C1P-201ENST00000608504 942 ntBASIC2.11□□□□□ -2.07
APOBP04114 AC245100.7-201ENST00000609678 442 ntBASIC2.11□□□□□ -2.07
APOBP04114 AC010149.2-201ENST00000637608 315 ntBASIC2.11□□□□□ -2.07
APOBP04114 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.11□□□□□ -2.07
APOBP04114 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.11□□□□□ -2.07
APOBP04114 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 AC093849.1-201ENST00000563631 2209 ntBASIC2.11□□□□□ -2.07
APOBP04114 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
APOBP04114 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
APOBP04114 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
APOBP04114 SNORA5B-201ENST00000363786 132 ntBASIC2.11□□□□□ -2.07
APOBP04114 U3.23-201ENST00000391132 200 ntBASIC2.11□□□□□ -2.07
APOBP04114 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBP04114 HIGD1AP12-201ENST00000427832 281 ntBASIC2.11□□□□□ -2.07
APOBP04114 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBP04114 TRAV15-201ENST00000556680 249 ntBASIC2.11□□□□□ -2.07
APOBP04114 IGHV3-29-201ENST00000604817 344 ntBASIC2.11□□□□□ -2.07
APOBP04114 MIR7702-201ENST00000621931 59 ntBASIC2.11□□□□□ -2.07
APOBP04114 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC2.11□□□□□ -2.07
APOBP04114 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 OR13C3-201ENST00000374781 1108 ntBASIC2.1□□□□□ -2.07
APOBP04114 AL031679.1-201ENST00000400616 525 ntBASIC2.1□□□□□ -2.07
APOBP04114 MTND4P22-201ENST00000413116 1169 ntBASIC2.1□□□□□ -2.07
APOBP04114 RPL6P21-201ENST00000418672 846 ntBASIC2.1□□□□□ -2.07
APOBP04114 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.1□□□□□ -2.07
APOBP04114 AC117434.1-201ENST00000419971 836 ntBASIC2.1□□□□□ -2.07
APOBP04114 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.1□□□□□ -2.07
APOBP04114 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.1□□□□□ -2.07
APOBP04114 AC096638.2-201ENST00000434965 711 ntBASIC2.1□□□□□ -2.07
APOBP04114 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.1□□□□□ -2.07
APOBP04114 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.1□□□□□ -2.07
APOBP04114 MIR4276-201ENST00000584832 70 ntBASIC2.1□□□□□ -2.07
APOBP04114 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.1□□□□□ -2.07
APOBP04114 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.1□□□□□ -2.07
APOBP04114 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
APOBP04114 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC2.1□□□□□ -2.07
APOBP04114 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.1□□□□□ -2.07
APOBP04114 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 SNORA54-201ENST00000384281 123 ntBASIC2.1□□□□□ -2.07
APOBP04114 AL139413.1-201ENST00000421309 217 ntBASIC2.1□□□□□ -2.07
APOBP04114 SETP5-201ENST00000437270 562 ntBASIC2.1□□□□□ -2.07
APOBP04114 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.1□□□□□ -2.07
APOBP04114 snoU109.6-201ENST00000516831 118 ntBASIC2.1□□□□□ -2.07
APOBP04114 UBTFL9-201ENST00000534504 1148 ntBASIC2.1□□□□□ -2.07
APOBP04114 H3F3AP1-201ENST00000559984 334 ntBASIC2.1□□□□□ -2.07
APOBP04114 AL354760.1-201ENST00000608357 643 ntBASIC2.1□□□□□ -2.07
APOBP04114 MIR7851-201ENST00000610611 160 ntBASIC2.1□□□□□ -2.07
APOBP04114 Z83843.1-201ENST00000604070 3685 ntBASIC2.1□□□□□ -2.07
APOBP04114 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
APOBP04114 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.1□□□□□ -2.07
APOBP04114 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
APOBP04114 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC2.1□□□□□ -2.07
APOBP04114 AP003122.5-201ENST00000527668 3766 ntBASIC2.1□□□□□ -2.07
APOBP04114 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 AC062016.1-201ENST00000355719 319 ntBASIC2.1□□□□□ -2.07
APOBP04114 VN1R8P-201ENST00000407739 893 ntBASIC2.1□□□□□ -2.07
APOBP04114 BTF3P9-201ENST00000418784 283 ntBASIC2.1□□□□□ -2.07
APOBP04114 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.1□□□□□ -2.07
APOBP04114 FTH1P1-201ENST00000437933 532 ntBASIC2.1□□□□□ -2.07
APOBP04114 RN7SKP132-201ENST00000516001 208 ntBASIC2.1□□□□□ -2.07
APOBP04114 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.1□□□□□ -2.07
APOBP04114 AL121576.1-201ENST00000556055 276 ntBASIC2.1□□□□□ -2.07
APOBP04114 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.1□□□□□ -2.07
APOBP04114 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.1□□□□□ -2.07
APOBP04114 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.1□□□□□ -2.07
APOBP04114 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.1□□□□□ -2.07
APOBP04114 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC2.1□□□□□ -2.07
APOBP04114 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms