Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
MT-ND1P03886 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
MT-ND1P03886 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
MT-ND1P03886 MTCO1P18-201ENST00000455518 1419 ntBASIC3.9□□□□□ -1.78
MT-ND1P03886 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
MT-ND1P03886 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.9□□□□□ -1.78
MT-ND1P03886 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
MT-ND1P03886 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
MT-ND1P03886 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MT-ND1P03886 RN7SKP103-201ENST00000363848 320 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MT-ND1P03886 RNU6-207P-201ENST00000384137 107 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MT-ND1P03886 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.9□□□□□ -1.79
MT-ND1P03886 HMGB3P19-201ENST00000403971 560 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 HMGB3P18-201ENST00000406327 590 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 MIR1179-201ENST00000408703 91 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MT-ND1P03886 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AL356387.2-201ENST00000422272 243 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 MTCO1P54-201ENST00000430139 712 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AC011742.1-201ENST00000431448 434 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 RPL37P1-201ENST00000432310 284 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 RPS26P40-201ENST00000435209 294 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MT-ND1P03886 VN1R25P-201ENST00000443385 738 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 HMGB1P48-201ENST00000446155 598 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 RAD23BP3-201ENST00000454157 1152 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 VN1R40P-201ENST00000455196 941 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 RN7SL610P-201ENST00000463845 291 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 HMGB1P38-201ENST00000490557 577 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.9□□□□□ -1.79
MT-ND1P03886 BNIP3P41-201ENST00000503774 571 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.9□□□□□ -1.79
MT-ND1P03886 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.9□□□□□ -1.79
MT-ND1P03886 HMGB1P23-201ENST00000518743 568 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC138701.1-201ENST00000524329 714 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.9□□□□□ -1.79
MT-ND1P03886 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AL360157.1-201ENST00000565962 87 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
MT-ND1P03886 RN7SL622P-201ENST00000585292 275 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AC008507.2-201ENST00000588402 1176 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AC011492.1-201ENST00000600023 315 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AC125494.3-201ENST00000602759 455 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 LLPHP1-201ENST00000603571 367 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AC112503.1-201ENST00000608436 391 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC093875.1-201ENST00000623688 504 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 AL445984.1-201ENST00000637834 659 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.9□□□□□ -1.79
MT-ND1P03886 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MT-ND1P03886 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MT-ND1P03886 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MT-ND1P03886 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.9□□□□□ -1.79
MT-ND1P03886 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
MT-ND1P03886 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.9□□□□□ -1.79
MT-ND1P03886 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MT-ND1P03886 Z82217.1-201ENST00000625157 8149 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MT-ND1P03886 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MT-ND1P03886 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MT-ND1P03886 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MT-ND1P03886 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.89□□□□□ -1.79
MT-ND1P03886 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MT-ND1P03886 RPS3AP23-201ENST00000401762 784 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 RNA5SP239-201ENST00000410218 129 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 PRELID3BP11-201ENST00000414230 479 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.89□□□□□ -1.79
MT-ND1P03886 AC008173.1-201ENST00000418901 264 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 MFSD13B-201ENST00000420133 1290 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 RPEP3-201ENST00000425462 676 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.89□□□□□ -1.79
MT-ND1P03886 AC087650.1-201ENST00000431445 468 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.89□□□□□ -1.79
MT-ND1P03886 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MT-ND1P03886 AC068135.1-201ENST00000446164 246 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 HMGB1P16-201ENST00000447155 540 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 TVP23BP2-201ENST00000455082 615 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 SNORD108-201ENST00000459332 71 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 RPL35AP28-201ENST00000459730 331 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 AC104982.1-201ENST00000478775 574 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 AP000926.1-201ENST00000479573 241 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.89□□□□□ -1.79
MT-ND1P03886 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.89□□□□□ -1.79
MT-ND1P03886 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.89□□□□□ -1.79
MT-ND1P03886 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.89□□□□□ -1.79
MT-ND1P03886 AC069306.1-201ENST00000507006 843 ntBASIC3.89□□□□□ -1.79
MT-ND1P03886 AC109458.1-201ENST00000508858 316 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms