Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC068993.1-201ENST00000546724 589 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC010198.2-201ENST00000550612 259 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 TRAV15-201ENST00000556680 249 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC087465.1-201ENST00000560574 245 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC138915.2-201ENST00000569776 97 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC090312.1-201ENST00000580637 348 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC080013.3-201ENST00000606839 578 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AL049539.1-201ENST00000611964 459 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC091953.3-201ENST00000623220 236 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 ZNF137P-201ENST00000456718 1920 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AL049555.1-201ENST00000562834 1933 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC010928.1-201ENST00000592477 1447 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC117529.2-201ENST00000512159 2068 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AL391684.1-202ENST00000641293 1636 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
NKX2-2O95096 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
NKX2-2O95096 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX2-2O95096 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX2-2O95096 AC108751.5-201ENST00000492880 1336 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AC126323.6-202ENST00000568092 3511 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
NKX2-2O95096 FAM133CP-201ENST00000332869 704 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 RNU6-621P-201ENST00000364752 109 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 Y_RNA.408-201ENST00000383987 102 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 RNU2-42P-201ENST00000410697 113 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AC010099.3-201ENST00000423896 409 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AL360081.1-201ENST00000428299 555 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 HIGD1AP4-201ENST00000430194 280 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AC073143.1-201ENST00000436316 395 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 MTCO2P20-201ENST00000437339 673 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX2-2O95096 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 MTCO2P6-201ENST00000463134 685 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AC006967.1-201ENST00000467608 589 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AC068587.2-201ENST00000478386 781 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AC079395.1-201ENST00000510981 262 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AC116353.3-201ENST00000511215 249 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 MTCO1P30-201ENST00000515244 580 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.27□□□□□ -1.73
NKX2-2O95096 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AL161713.1-201ENST00000555538 145 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.27□□□□□ -1.73
NKX2-2O95096 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.27□□□□□ -1.73
NKX2-2O95096 MIR4504-201ENST00000577413 92 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 HMGB2P1-201ENST00000591146 634 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 VN1R78P-201ENST00000597393 564 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 DUXAP3-201ENST00000603616 594 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AC113194.1-201ENST00000606037 500 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 AC091946.2-201ENST00000606105 291 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 TUSC7.1-201ENST00000610969 165 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 MIR4278-201ENST00000636094 69 ntBASIC4.27□□□□□ -1.73
NKX2-2O95096 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
NKX2-2O95096 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX2-2O95096 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX2-2O95096 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-2O95096 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX2-2O95096 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX2-2O95096 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 Z95327.2-201ENST00000414579 1873 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 AC107982.1-201ENST00000507171 1300 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX2-2O95096 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX2-2O95096 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-2O95096 RNU6-1243P-201ENST00000364028 107 ntBASIC4.26□□□□□ -1.73
NKX2-2O95096 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms