Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC012314.7-201ENST00000619693 93 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
SNRNP200O75643 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SNRNP200O75643 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.32□□□□□ -1.88
SNRNP200O75643 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.31□□□□□ -1.88
SNRNP200O75643 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRNP200O75643 AC104978.1-201ENST00000449387 391 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AC115115.1-201ENST00000449927 248 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRNP200O75643 AC010307.1-201ENST00000467206 836 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 RPL7P38-201ENST00000488396 739 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRNP200O75643 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRNP200O75643 DUXAP6-201ENST00000553858 601 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AL121576.1-201ENST00000556055 276 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.31□□□□□ -1.88
SNRNP200O75643 SRGNP1-201ENST00000603392 451 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 ELOCP35-201ENST00000604289 336 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AL732618.1-201ENST00000623251 301 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AC015908.5-201ENST00000623289 343 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 AC090337.1-201ENST00000579651 2074 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.31□□□□□ -1.88
SNRNP200O75643 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRNP200O75643 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNRNP200O75643 KRR1P1-201ENST00000419430 803 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 RPS12P5-201ENST00000423449 371 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AL451062.2-201ENST00000427515 271 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AC006946.1-201ENST00000429106 328 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRNP200O75643 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRNP200O75643 AC073387.1-201ENST00000453261 709 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 MTCO3P16-201ENST00000454456 754 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.31□□□□□ -1.88
SNRNP200O75643 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.31□□□□□ -1.88
SNRNP200O75643 NARSP2-201ENST00000518524 679 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.31□□□□□ -1.88
SNRNP200O75643 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.31□□□□□ -1.88
SNRNP200O75643 AP003499.2-201ENST00000624100 483 ntBASIC3.31□□□□□ -1.88
SNRNP200O75643 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.31□□□□□ -1.88
SNRNP200O75643 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.31□□□□□ -1.88
SNRNP200O75643 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
SNRNP200O75643 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNRNP200O75643 RNA5SP235-201ENST00000365411 114 ntBASIC3.3□□□□□ -1.88
SNRNP200O75643 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.3□□□□□ -1.88
SNRNP200O75643 AC005019.1-201ENST00000436455 431 ntBASIC3.3□□□□□ -1.88
SNRNP200O75643 SKP1P1-201ENST00000438081 489 ntBASIC3.3□□□□□ -1.88
SNRNP200O75643 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.3□□□□□ -1.88
SNRNP200O75643 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.3□□□□□ -1.88
SNRNP200O75643 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.3□□□□□ -1.88
SNRNP200O75643 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.3□□□□□ -1.88
SNRNP200O75643 AC091153.1-201ENST00000466297 402 ntBASIC3.3□□□□□ -1.88
SNRNP200O75643 HMGB3P13-201ENST00000511263 607 ntBASIC3.3□□□□□ -1.88
SNRNP200O75643 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.3□□□□□ -1.88
SNRNP200O75643 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.3□□□□□ -1.88
SNRNP200O75643 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.3□□□□□ -1.88
SNRNP200O75643 AC005412.1-201ENST00000580812 1049 ntBASIC3.3□□□□□ -1.88
SNRNP200O75643 AC009303.3-201ENST00000591103 736 ntBASIC3.3□□□□□ -1.88
SNRNP200O75643 AC005972.3-201ENST00000606304 481 ntBASIC3.3□□□□□ -1.88
SNRNP200O75643 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.3□□□□□ -1.88
SNRNP200O75643 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.29□□□□□ -1.88
SNRNP200O75643 RNU1-89P-201ENST00000384592 164 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.29□□□□□ -1.88
SNRNP200O75643 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.29□□□□□ -1.88
SNRNP200O75643 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.29□□□□□ -1.88
SNRNP200O75643 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.29□□□□□ -1.88
SNRNP200O75643 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.29□□□□□ -1.88
SNRNP200O75643 ACTG1P13-201ENST00000486987 1043 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 PRELID3BP7-201ENST00000503606 469 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNRNP200O75643 AL121766.1-201ENST00000547436 487 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 AC106785.3-201ENST00000564064 847 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 AC020914.4-201ENST00000597690 277 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 CKS1BP3-201ENST00000600888 237 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.29□□□□□ -1.88
SNRNP200O75643 AC105227.2-201ENST00000615075 605 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.29□□□□□ -1.88
SNRNP200O75643 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNRNP200O75643 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SNRNP200O75643 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.29□□□□□ -1.88
SNRNP200O75643 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNRNP200O75643 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SNRNP200O75643 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNRNP200O75643 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNRNP200O75643 AC007068.1-201ENST00000396690 844 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.29□□□□□ -1.88
SNRNP200O75643 RPL23AP83-201ENST00000434984 473 ntBASIC3.29□□□□□ -1.88
SNRNP200O75643 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms