Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.06□□□□□ -1.76
SDC3O75056 MIR23A-201ENST00000385245 73 ntBASIC4.06□□□□□ -1.76
SDC3O75056 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SDC3O75056 PTMAP2-201ENST00000397627 327 ntBASIC4.06□□□□□ -1.76
SDC3O75056 RNU6ATAC-201ENST00000408749 126 ntBASIC4.06□□□□□ -1.76
SDC3O75056 HSPE1P12-201ENST00000412576 301 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AL121882.1-201ENST00000422893 417 ntBASIC4.06□□□□□ -1.76
SDC3O75056 OR5BE1P-201ENST00000425977 939 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.06□□□□□ -1.76
SDC3O75056 GOT2P5-201ENST00000433995 546 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.06□□□□□ -1.76
SDC3O75056 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDC3O75056 RPS4XP4-201ENST00000443195 763 ntBASIC4.06□□□□□ -1.76
SDC3O75056 VN1R34P-201ENST00000447387 883 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AC104306.1-201ENST00000449702 371 ntBASIC4.06□□□□□ -1.76
SDC3O75056 RPL38P1-201ENST00000460914 211 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AC022034.3-201ENST00000471393 478 ntBASIC4.06□□□□□ -1.76
SDC3O75056 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.06□□□□□ -1.76
SDC3O75056 MTATP6P22-201ENST00000507369 598 ntBASIC4.06□□□□□ -1.76
SDC3O75056 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SDC3O75056 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.06□□□□□ -1.76
SDC3O75056 IFITM8P-201ENST00000522529 394 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.06□□□□□ -1.76
SDC3O75056 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.06□□□□□ -1.76
SDC3O75056 AL136520.1-202ENST00000555494 763 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.06□□□□□ -1.76
SDC3O75056 HSPE1P5-201ENST00000561489 272 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AC053481.3-201ENST00000577881 843 ntBASIC4.06□□□□□ -1.76
SDC3O75056 MIR5685-201ENST00000579080 79 ntBASIC4.06□□□□□ -1.76
SDC3O75056 OR1AB1P-201ENST00000585564 761 ntBASIC4.06□□□□□ -1.76
SDC3O75056 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.06□□□□□ -1.76
SDC3O75056 AL139395.1-201ENST00000603662 160 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.06□□□□□ -1.76
SDC3O75056 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.06□□□□□ -1.76
SDC3O75056 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDC3O75056 AC067852.7-201ENST00000623270 535 ntBASIC4.06□□□□□ -1.76
SDC3O75056 AC009452.1-201ENST00000640823 606 ntBASIC4.06□□□□□ -1.76
SDC3O75056 OR5BE1P-202ENST00000641168 1176 ntBASIC4.06□□□□□ -1.76
SDC3O75056 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDC3O75056 AL356489.2-201ENST00000566968 3528 ntBASIC4.06□□□□□ -1.76
SDC3O75056 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDC3O75056 AC090229.1-201ENST00000590983 1609 ntBASIC4.06□□□□□ -1.76
SDC3O75056 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SDC3O75056 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDC3O75056 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDC3O75056 AC016588.2-201ENST00000632484 3021 ntBASIC4.05□□□□□ -1.76
SDC3O75056 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.05□□□□□ -1.76
SDC3O75056 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SDC3O75056 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.05□□□□□ -1.76
SDC3O75056 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDC3O75056 AC011266.1-201ENST00000624119 3569 ntBASIC4.05□□□□□ -1.76
SDC3O75056 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SDC3O75056 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.05□□□□□ -1.76
SDC3O75056 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDC3O75056 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.05□□□□□ -1.76
SDC3O75056 RNU6-609P-201ENST00000365459 107 ntBASIC4.05□□□□□ -1.76
SDC3O75056 RHOT1P2-201ENST00000366423 333 ntBASIC4.05□□□□□ -1.76
SDC3O75056 MTATP6P31-201ENST00000406985 692 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AL603766.1-201ENST00000407763 664 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AL450992.3-201ENST00000413192 568 ntBASIC4.05□□□□□ -1.76
SDC3O75056 VTA1P1-201ENST00000414044 866 ntBASIC4.05□□□□□ -1.76
SDC3O75056 RAC1P3-201ENST00000416129 580 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AL161631.1-201ENST00000417933 486 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.05□□□□□ -1.76
SDC3O75056 SKP1P3-201ENST00000429280 487 ntBASIC4.05□□□□□ -1.76
SDC3O75056 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AC007389.2-201ENST00000434630 306 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AC105402.2-201ENST00000438503 358 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AL353748.1-201ENST00000440753 474 ntBASIC4.05□□□□□ -1.76
SDC3O75056 RRM2P4-201ENST00000441721 562 ntBASIC4.05□□□□□ -1.76
SDC3O75056 RNFT1P2-201ENST00000443064 757 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AC069540.1-201ENST00000446320 988 ntBASIC4.05□□□□□ -1.76
SDC3O75056 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SDC3O75056 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.05□□□□□ -1.76
SDC3O75056 ATP5G1P3-201ENST00000463301 410 ntBASIC4.05□□□□□ -1.76
SDC3O75056 RPL23AP71-201ENST00000470966 469 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AC090013.1-201ENST00000485147 480 ntBASIC4.05□□□□□ -1.76
SDC3O75056 RPS4XP15-201ENST00000489210 795 ntBASIC4.05□□□□□ -1.76
SDC3O75056 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.05□□□□□ -1.76
SDC3O75056 PPBPP1-201ENST00000510807 373 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.05□□□□□ -1.76
SDC3O75056 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.05□□□□□ -1.76
SDC3O75056 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.05□□□□□ -1.76
SDC3O75056 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.05□□□□□ -1.76
SDC3O75056 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.05□□□□□ -1.76
SDC3O75056 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.05□□□□□ -1.76
SDC3O75056 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.05□□□□□ -1.76
SDC3O75056 AC079148.1-201ENST00000565944 819 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AC090751.1-201ENST00000566966 267 ntBASIC4.05□□□□□ -1.76
SDC3O75056 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
SDC3O75056 AL139286.1-201ENST00000604465 483 ntBASIC4.05□□□□□ -1.76
SDC3O75056 RPL21P136-201ENST00000605378 396 ntBASIC4.05□□□□□ -1.76
SDC3O75056 MIR7151-201ENST00000617477 60 ntBASIC4.05□□□□□ -1.76
SDC3O75056 AC006213.5-201ENST00000619673 288 ntBASIC4.05□□□□□ -1.76
SDC3O75056 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.05□□□□□ -1.76
SDC3O75056 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SDC3O75056 HSPA8P19-201ENST00000505359 1517 ntBASIC4.05□□□□□ -1.76
SDC3O75056 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDC3O75056 AC022893.2-201ENST00000564832 3296 ntBASIC4.04□□□□□ -1.76
SDC3O75056 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms