Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RNU1-89P-201ENST00000384592 164 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 MIR550A3-201ENST00000390735 95 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC188H7C350 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC188H7C350 Y_RNA.625-201ENST00000411256 107 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 RPL37P18-201ENST00000411602 243 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AC115285.1-201ENST00000424879 736 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 RPS7P2-201ENST00000435134 607 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC188H7C350 RPS3AP53-201ENST00000454716 778 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC188H7C350 CDC42P1-201ENST00000456658 548 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CCDC188H7C350 MTND3P3-201ENST00000505004 126 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AC108043.1-201ENST00000512696 574 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 RNU6-202P-201ENST00000515998 96 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AF279873.1-201ENST00000523393 313 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC188H7C350 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AL161713.1-201ENST00000555538 145 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AC023825.1-201ENST00000566704 1030 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC188H7C350 AC020914.4-201ENST00000597690 277 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 BNIP3P27-201ENST00000599991 412 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC188H7C350 MRPS35P3-201ENST00000603189 709 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC188H7C350 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC188H7C350 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC188H7C350 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC188H7C350 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CCDC188H7C350 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC188H7C350 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CCDC188H7C350 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC188H7C350 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
CCDC188H7C350 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC188H7C350 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC188H7C350 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC188H7C350 OR56B2P-202ENST00000641377 2453 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC188H7C350 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC188H7C350 SAGE2P-201ENST00000420011 2126 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 ERCC6-202ENST00000374127 1782 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC188H7C350 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC188H7C350 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC188H7C350 RNU6-1293P-201ENST00000384077 107 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC188H7C350 AL139128.1-201ENST00000413921 941 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC188H7C350 RPS12P5-201ENST00000423449 371 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC188H7C350 PTP4A1P7-201ENST00000423476 514 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC188H7C350 AC008065.1-201ENST00000428525 348 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC188H7C350 NPM1P34-201ENST00000428821 893 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC188H7C350 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC188H7C350 AC096638.2-201ENST00000434965 711 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC188H7C350 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC188H7C350 RPL7P61-201ENST00000451721 751 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC188H7C350 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC188H7C350 RNU7-140P-201ENST00000459546 60 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 NAP1L1P3-201ENST00000462291 880 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 RPL21P126-201ENST00000470049 478 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC188H7C350 OR7H2P-201ENST00000513483 306 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AP003066.2-201ENST00000529375 555 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC188H7C350 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC188H7C350 AC084783.1-201ENST00000565846 910 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC079171.1-201ENST00000568788 914 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 MTCO1P40-201ENST00000574371 625 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC090666.1-201ENST00000578241 445 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC067852.4-201ENST00000590314 478 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC133794.1-201ENST00000602731 914 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC133644.2-201ENST00000608142 540 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC124016.2-201ENST00000610058 665 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 AC012409.3-201ENST00000611343 981 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 MIR486-1-201ENST00000612171 68 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 MIR6864-201ENST00000617935 70 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 RNU6-156P-201ENST00000621869 107 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC188H7C350 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC188H7C350 Z73965.1-201ENST00000623412 2297 ntBASIC4.33□□□□□ -1.72
CCDC188H7C350 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC188H7C350 RAD17P1-201ENST00000418130 2042 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms