Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC008958.1-201ENST00000511047 682 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC008494.2-201ENST00000514544 370 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AP000916.1-201ENST00000533869 835 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC090312.2-201ENST00000582687 378 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AL591034.3-201ENST00000605511 685 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC015813.4-201ENST00000610469 179 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AL353726.1-201ENST00000614041 1000 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC024595.1-201ENST00000623088 387 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AL590396.2-201ENST00000636511 1041 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC025125.1-201ENST00000624743 1922 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.9□□□□□ -1.78
NPIPA2E9PIF3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPIPA2E9PIF3 LARP1BP1-201ENST00000506036 1359 ntBASIC3.9□□□□□ -1.78
NPIPA2E9PIF3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPIPA2E9PIF3 AC119744.1-201ENST00000454746 1715 ntBASIC3.9□□□□□ -1.78
NPIPA2E9PIF3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC007685.1-201ENST00000329806 452 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 OR6K3-202ENST00000368146 996 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL161909.1-201ENST00000397390 712 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 HDGFP1-201ENST00000405943 252 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC073310.1-201ENST00000423226 1033 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC073335.1-201ENST00000427776 363 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC093422.3-201ENST00000428506 305 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC104689.1-201ENST00000473356 768 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC093824.1-201ENST00000508796 343 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP49-201ENST00000516450 115 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AP001180.3-201ENST00000582221 145 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC068790.5-201ENST00000602741 355 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL354984.3-201ENST00000604803 325 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 BNIP3P19-201ENST00000605397 577 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 VN1R9P-201ENST00000614184 867 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL021997.2-201ENST00000615674 271 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC099669.2-201ENST00000616549 437 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 MIR6864-201ENST00000617935 70 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC073569.3-201ENST00000619055 682 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AL713922.2-201ENST00000619384 716 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC138907.10-201ENST00000623708 983 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC090506.2-201ENST00000624521 419 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 FP325313.1-201ENST00000638228 703 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 AC138393.1-206ENST00000540997 1886 ntBASIC3.9□□□□□ -1.79
NPIPA2E9PIF3 SEC63P2-201ENST00000503863 1939 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 SNORD56.4-201ENST00000363883 71 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 U3.15-201ENST00000365398 212 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AL583835.1-201ENST00000399570 407 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC097374.1-203ENST00000400783 485 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP317-201ENST00000410176 116 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP36-201ENST00000410197 133 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 RNU6-628P-201ENST00000410675 107 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 MIR1911-201ENST00000410783 80 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP311-201ENST00000411290 116 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC092745.2-202ENST00000411880 369 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 PDSS1P1-201ENST00000422953 1114 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 OR5AW1P-201ENST00000426334 1006 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms