Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 MIR3074-201ENST00000384885 81 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-603P-201ENST00000411403 107 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 EIF2S2P3-201ENST00000428356 999 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC012497.1-201ENST00000429392 575 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC099563.1-201ENST00000456086 418 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 MTND2P39-201ENST00000457230 764 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC010618.1-201ENST00000469924 477 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC025181.1-201ENST00000477507 416 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC090543.1-201ENST00000492168 485 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 MTCO1P31-201ENST00000506355 492 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-491P-201ENST00000516099 110 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 RNA5SP164-201ENST00000516533 110 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 IGKV2D-10-201ENST00000520194 281 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 PARP1P2-201ENST00000556806 195 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC120057.2-201ENST00000571520 271 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC017076.1-201ENST00000607613 578 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 RNVU1-4-201ENST00000612985 164 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AL731566.2-201ENST00000618971 317 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 U7.8-201ENST00000619968 63 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 MIR6500-201ENST00000622700 86 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 CDRT1-208ENST00000630868 794 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 AC024341.1-201ENST00000526444 1552 ntBASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM49D1C9J1S8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 U1.1-201ENST00000384101 164 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AL589655.1-201ENST00000405398 482 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AL353692.2-201ENST00000407054 335 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 MORF4L1P7-201ENST00000426038 703 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 RSL24D1P6-201ENST00000426934 401 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 NDUFS5P3-201ENST00000450668 321 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 EIF2S2P4-201ENST00000461070 984 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC093267.1-201ENST00000489176 961 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC106872.2-201ENST00000494303 480 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 MTND3P3-201ENST00000505004 126 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC025768.1-201ENST00000510057 267 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 DEFB109D-201ENST00000529497 240 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC135001.1-201ENST00000544546 283 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AL121766.1-201ENST00000547436 487 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC025884.1-201ENST00000556034 378 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 TRAV15-201ENST00000556680 249 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC084757.1-201ENST00000559987 490 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC069366.1-201ENST00000583159 838 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC010200.2-201ENST00000605098 235 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 CR589904.2-201ENST00000612533 440 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 MIR6716-201ENST00000613413 80 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC067852.7-201ENST00000623270 535 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AP006248.2-201ENST00000623309 592 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 SAGE2P-201ENST00000420011 2126 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 AC114546.3-201ENST00000623582 1734 ntBASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM49D1C9J1S8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms