Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 MIR3912-201ENST00000577566 105 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 MIR4436B2-201ENST00000581415 91 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 MIR4436B1-201ENST00000583272 91 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC090181.2-201ENST00000602975 672 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC103792.1-201ENST00000603591 919 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC013244.1-201ENST00000604279 193 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC211433.2-201ENST00000608433 387 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 MIR6715B-201ENST00000637172 77 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SRRM4A7MD48 NXPH1-205ENST00000602349 1953 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC027290.2-201ENST00000623210 18662 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 RNU1-108P-201ENST00000362556 161 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 RNU6-582P-201ENST00000362989 107 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 RNA5SP28-201ENST00000363841 119 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 MIR649-201ENST00000384843 97 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 RNU6-1300P-201ENST00000391046 108 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 FCF1P5-201ENST00000406490 482 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AL133384.1-201ENST00000412744 351 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AL449283.1-202ENST00000418249 604 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 EIF4EP1-201ENST00000422311 642 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 C1DP1-201ENST00000426049 402 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC114973.1-201ENST00000429057 632 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC092324.1-201ENST00000468671 324 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC090013.1-201ENST00000485147 480 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC093270.2-201ENST00000486157 792 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC011352.3-201ENST00000505162 593 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC118282.1-201ENST00000506408 765 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 RN7SKP277-201ENST00000516895 283 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AP001189.2-201ENST00000527320 189 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 OR8L1P-201ENST00000534005 955 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AP001180.3-201ENST00000582221 145 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 RNA5SP108-201ENST00000605921 117 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC009237.15-201ENST00000610252 501 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC139769.1-204ENST00000472297 1931 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AL592182.3-201ENST00000642132 3304 ntBASIC3.64□□□□□ -1.83
SRRM4A7MD48 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRRM4A7MD48 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 AC091046.3-201ENST00000631455 1574 ntBASIC3.63□□□□□ -1.83
SRRM4A7MD48 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SRRM4A7MD48 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.63□□□□□ -1.83
SRRM4A7MD48 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms