Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC073592.7-201ENST00000623659 507 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC119674.1-207ENST00000641355 633 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC009093.8-201ENST00000641769 292 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC092079.1-201ENST00000558620 1985 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AL359715.4-201ENST00000606629 1436 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 MFSD8-236ENST00000641509 4050 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AC106871.1-201ENST00000568324 3102 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 AL451142.2-201ENST00000429076 2090 ntBASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.01□□□□□ -1.77
SMIM28A0A1B0GU29 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AL445437.1-201ENST00000623157 3087 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 ASNSP1-201ENST00000518311 1939 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 UBE2V1P15-201ENST00000407776 448 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AL160275.2-201ENST00000412010 394 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 NAP1L1P2-201ENST00000414182 1089 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 MTND4P24-201ENST00000424002 397 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 FAR1P1-201ENST00000427163 934 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 HIGD1AP12-201ENST00000427832 281 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AL050321.1-201ENST00000432363 400 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 ATP5HP2-201ENST00000433885 485 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 HMGB3P9-201ENST00000441799 583 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC098824.1-201ENST00000453565 980 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 RPL7L1P8-201ENST00000469911 741 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 TRBV12-2-201ENST00000489763 344 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC006499.5-201ENST00000505037 514 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 HMGB3P13-201ENST00000511263 607 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 HAUS1P3-201ENST00000523909 662 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 OR7E13P-201ENST00000526052 910 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 CCNG2P1-201ENST00000549521 1000 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC008739.3-201ENST00000603262 127 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC067931.1-201ENST00000624190 671 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC020978.9-201ENST00000624380 1141 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 AC009501.3-201ENST00000605001 1352 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 PHKBP1-201ENST00000450951 1951 ntBASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SMIM28A0A1B0GU29 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 RNA5SP119-201ENST00000362715 117 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 SNORD51.1-201ENST00000365405 77 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 AC019155.1-201ENST00000382242 574 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 RNU6-532P-201ENST00000384318 107 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 ATP5A1P2-201ENST00000412323 255 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 MTATP6P19-201ENST00000413797 659 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 AL645931.1-201ENST00000439737 410 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 RPL6P5-201ENST00000445678 828 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 RPS3AP46-201ENST00000448352 682 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 AL451050.1-201ENST00000450126 415 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 CCDC75P1-201ENST00000469247 791 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 RN7SKP18-201ENST00000516005 275 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 AP003168.1-201ENST00000530091 307 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 MAPK10-253ENST00000641010 4072 ntBASIC3.99□□□□□ -1.77
SMIM28A0A1B0GU29 LINC01109-201ENST00000603837 3081 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms