Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC099676.1-201ENST00000608886 657 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AC112200.1-201ENST00000625015 234 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 TNPO1P3-201ENST00000436471 2662 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC106871.1-201ENST00000568324 3102 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 SNORA11B-201ENST00000408175 129 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 RN7SKP285-201ENST00000410137 318 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 RNU6-55P-201ENST00000411092 107 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 RNU6-954P-201ENST00000411355 107 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 ATP5A1P2-201ENST00000412323 255 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC017079.2-201ENST00000416102 485 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 RPL17P36-201ENST00000420302 549 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC093698.1-201ENST00000423843 571 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC022022.1-201ENST00000430304 178 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 RPL7P31-201ENST00000450192 724 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 MTND6P32-201ENST00000457611 483 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC023598.1-201ENST00000472521 361 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC037198.2-201ENST00000478845 733 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 HMGN1P11-201ENST00000508668 303 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 RNU6-943P-201ENST00000516960 98 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC011602.1-201ENST00000546484 331 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC106785.3-201ENST00000564064 847 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AL391497.1-201ENST00000608671 547 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC004241.3-201ENST00000611728 517 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AC068724.3-201ENST00000625906 87 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 NMD3P1-201ENST00000439704 1488 ntBASIC3.16□□□□□ -1.9
TRAV27A0A087WT01 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRAV27A0A087WT01 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.15□□□□□ -1.9
TRAV27A0A087WT01 AC009313.2-201ENST00000417893 1941 ntBASIC3.15□□□□□ -1.9
TRAV27A0A087WT01 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AL136131.1-201ENST00000406079 803 ntBASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AL513174.1-201ENST00000423182 629 ntBASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AC110768.1-201ENST00000509222 400 ntBASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 SNORD116-26-201ENST00000516006 96 ntBASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 SNORA70.19-201ENST00000516717 90 ntBASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 IGKV2D-23-201ENST00000518179 286 ntBASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 MIR4644-201ENST00000579929 84 ntBASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AC008121.2-201ENST00000614647 523 ntBASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 AC009452.1-201ENST00000640823 606 ntBASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.15□□□□□ -1.91
TRAV27A0A087WT01 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRAV27A0A087WT01 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms