Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.31□□□□□ -1.56
SHANK2Q9UPX8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 RNA5SP104-201ENST00000410989 118 ntBASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 RPSAP41-201ENST00000439695 860 ntBASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 NPM1P39-201ENST00000449818 867 ntBASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 U3.44-201ENST00000458938 192 ntBASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 Vault.1-201ENST00000516474 102 ntBASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.3□□□□□ -1.56
SHANK2Q9UPX8 AC116096.1-201ENST00000566804 2314 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 SNORA80A-201ENST00000363922 136 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 RNA5SP42-201ENST00000364278 115 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 U3.19-201ENST00000390893 196 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 OR2X1P-201ENST00000421144 687 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 AL035458.1-201ENST00000433096 585 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 RSL24D1P3-201ENST00000449255 495 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 RPL5P30-201ENST00000465511 891 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 AC118465.1-201ENST00000513820 1271 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 AC011611.1-201ENST00000552179 197 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 U4.6-201ENST00000621618 127 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 AC015813.6-201ENST00000624409 5808 ntBASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHANK2Q9UPX8 AL078595.2-201ENST00000605309 1780 ntBASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 AC008065.1-201ENST00000428525 348 ntBASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 RPS4XP2-201ENST00000458402 793 ntBASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 S100A11P2-201ENST00000467589 312 ntBASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 AC034105.3-201ENST00000565294 442 ntBASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
SHANK2Q9UPX8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 RPS29P31-201ENST00000446147 164 ntBASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 RPL26P28-201ENST00000451325 435 ntBASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 AC073522.1-201ENST00000483312 377 ntBASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 BTF3L4P4-201ENST00000506381 449 ntBASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 AC011270.1-201ENST00000558606 583 ntBASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 AL033523.1-201ENST00000605153 153 ntBASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHANK2Q9UPX8 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 USP12PY-201ENST00000427677 1064 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 NPM1P48-201ENST00000436002 853 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 NPM1P17-201ENST00000479221 602 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms