Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SNORA75B-201ENST00000384053 137 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 AL391361.1-201ENST00000405580 489 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 AL034374.1-201ENST00000406329 351 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 OR6C66P-201ENST00000414917 930 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 SUMO2P3-201ENST00000438311 288 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 AC026410.2-201ENST00000460281 156 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 RPL7L1P8-201ENST00000469911 741 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 RPL23AP41-201ENST00000484754 458 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 TRBVA-201ENST00000498804 316 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 AC010343.2-201ENST00000510162 224 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 RNA5SP362-201ENST00000516048 118 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 NPM1P42-201ENST00000560329 862 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 SULT1C2P1-202ENST00000562418 459 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 BNIP3P25-201ENST00000596023 559 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 AL669831.3-213ENST00000636676 183 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 AP002364.1-201ENST00000623330 3386 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC121333.1-201ENST00000567488 2709 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC010401.2-201ENST00000575137 4934 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 Y_RNA.515-201ENST00000384535 112 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 RNU6-903P-201ENST00000391270 109 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 ATG3P1-201ENST00000419507 911 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 RPL7L1P10-201ENST00000427790 463 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 OR4K11P-201ENST00000431829 904 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AL161722.2-201ENST00000434731 981 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AL138799.3-201ENST00000438968 350 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 RNU7-27P-201ENST00000459281 62 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 RN7SL834P-201ENST00000461450 286 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 RPL23AP12-201ENST00000467573 473 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC124945.1-201ENST00000485133 188 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC116655.1-201ENST00000508324 901 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 RN7SKP283-201ENST00000517197 270 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC022360.1-201ENST00000521058 340 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 OR4K8P-201ENST00000578842 1048 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 MAGOH2P-202ENST00000584384 429 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC104695.2-201ENST00000605056 775 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 MIR6719-201ENST00000622428 87 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC010624.4-201ENST00000597606 1351 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PHF8Q9UPP1 AC138915.4-201ENST00000565549 4147 ntBASIC8.55□□□□□ -1.04
PHF8Q9UPP1 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AL158163.1-201ENST00000603915 1649 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AL512646.1-201ENST00000269395 1077 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AL139276.1-201ENST00000311910 1001 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 RNU6-593P-201ENST00000364716 112 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 Y_RNA.389-201ENST00000383924 113 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 RNU2-29P-201ENST00000410423 189 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 SDHDP6-201ENST00000414693 480 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms