Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 MIR3662-201ENST00000637030 95 ntBASIC5.6□□□□□ -1.51
MBD1Q9UIS9 MIR1321-201ENST00000637766 79 ntBASIC5.6□□□□□ -1.51
MBD1Q9UIS9 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MBD1Q9UIS9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
MBD1Q9UIS9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MBD1Q9UIS9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
MBD1Q9UIS9 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MBD1Q9UIS9 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MBD1Q9UIS9 AC093671.1-201ENST00000624981 2929 ntBASIC5.6□□□□□ -1.51
MBD1Q9UIS9 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.6□□□□□ -1.51
MBD1Q9UIS9 NLRP3P1-201ENST00000622303 1785 ntBASIC5.6□□□□□ -1.51
MBD1Q9UIS9 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MBD1Q9UIS9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MBD1Q9UIS9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AL353796.1-201ENST00000561542 3241 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 Y_RNA.142-201ENST00000363491 102 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 MIR137-201ENST00000385223 102 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 Y_RNA.598-201ENST00000410480 95 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 FCF1P2-201ENST00000415284 583 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 MTND2P23-201ENST00000422990 651 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 CYCSP11-201ENST00000436426 315 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 KRT8P51-201ENST00000438938 274 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 CEACAMP7-201ENST00000444105 496 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 Z80107.2-201ENST00000445127 392 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 RPS23P2-201ENST00000463671 415 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 RPS3AP14-201ENST00000483907 780 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 RN7SL97P-201ENST00000486780 299 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 RN7SKP67-201ENST00000515905 235 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 RNA5SP228-201ENST00000516232 133 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 RN7SKP66-201ENST00000516681 231 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 SNORA18.6-201ENST00000516792 115 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 Y_RNA.704-201ENST00000516851 102 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AP000859.1-201ENST00000525536 307 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 KPNA2P3-201ENST00000584190 848 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AC010200.2-201ENST00000605098 235 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AC025574.2-201ENST00000615621 514 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 MLECP1-201ENST00000615893 709 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AC108479.2-201ENST00000617314 601 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AC074140.1-201ENST00000621617 208 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 U6.107-201ENST00000637108 79 ntBASIC5.59□□□□□ -1.51
MBD1Q9UIS9 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MBD1Q9UIS9 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
MBD1Q9UIS9 AP005435.3-201ENST00000531260 3198 ntBASIC5.59□□□□□ -1.52
MBD1Q9UIS9 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AC079097.1-201ENST00000512187 1399 ntBASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AC144833.1-201ENST00000567953 4089 ntBASIC5.58□□□□□ -1.52
MBD1Q9UIS9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 RNU1-106P-201ENST00000384382 164 ntBASIC5.58□□□□□ -1.52
MBD1Q9UIS9 EI24P3-201ENST00000399046 1062 ntBASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AL589647.1-201ENST00000402485 466 ntBASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AL139128.1-201ENST00000413921 941 ntBASIC5.58□□□□□ -1.52
MBD1Q9UIS9 RPS27AP14-201ENST00000422868 454 ntBASIC5.58□□□□□ -1.52
MBD1Q9UIS9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AC111000.3-201ENST00000508057 576 ntBASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.58□□□□□ -1.52
MBD1Q9UIS9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms