Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 FCF1P8-201ENST00000510322 597 ntBASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 AC017037.2-201ENST00000513850 890 ntBASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 OR51C1P-201ENST00000608504 942 ntBASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 AL645937.1-201ENST00000641739 1652 ntBASIC5.57□□□□□ -1.52
RIMBP3Q9UFD9 AC093535.2-201ENST00000624769 2326 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 Z99755.1-201ENST00000414048 380 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 AC073335.1-201ENST00000427776 363 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 TRAV15-201ENST00000556680 249 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 MAPK10-253ENST00000641010 4072 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 AL513477.1-202ENST00000417061 214 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 AC006480.1-201ENST00000449887 378 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 AC008885.1-201ENST00000514930 301 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 NDUFB9P3-201ENST00000521269 501 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 AC006363.1-201ENST00000603806 463 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 AL773545.4-201ENST00000637262 310 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 AL513478.4-201ENST00000641636 310 ntBASIC5.56□□□□□ -1.52
RIMBP3Q9UFD9 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 SNORA70B-201ENST00000384210 135 ntBASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 RSL24D1P4-201ENST00000400938 484 ntBASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 BMS1P22-201ENST00000414726 313 ntBASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 AC126389.1-201ENST00000477436 290 ntBASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 AC132942.1-201ENST00000486753 483 ntBASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 AC005476.1-201ENST00000554427 397 ntBASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.55□□□□□ -1.52
RIMBP3Q9UFD9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 FRG1CP-201ENST00000358464 769 ntBASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 RPS4XP8-201ENST00000402039 771 ntBASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 RNA5SP184-201ENST00000411071 108 ntBASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 RN7SL863P-201ENST00000462370 296 ntBASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 RN7SKP31-201ENST00000516354 278 ntBASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 SLC25A36P1-201ENST00000590111 465 ntBASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 DDX6P1-205ENST00000441966 1436 ntBASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 AP002512.4-202ENST00000641599 4530 ntBASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIMBP3Q9UFD9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 SDCBPP2-201ENST00000424643 885 ntBASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 ISCA1P6-201ENST00000427740 390 ntBASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 AC105272.1-201ENST00000438604 198 ntBASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 RPS29P26-201ENST00000477483 171 ntBASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIMBP3Q9UFD9 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIMBP3Q9UFD9 snoU13.26-201ENST00000459452 105 ntBASIC5.52□□□□□ -1.53
RIMBP3Q9UFD9 UBA52P3-201ENST00000491303 382 ntBASIC5.52□□□□□ -1.53
RIMBP3Q9UFD9 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.52□□□□□ -1.53
RIMBP3Q9UFD9 PSMA2P1-201ENST00000526365 646 ntBASIC5.52□□□□□ -1.53
RIMBP3Q9UFD9 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.52□□□□□ -1.53
RIMBP3Q9UFD9 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms