Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 RN7SL542P-201ENST00000467147 294 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 AC092045.1-201ENST00000495716 1231 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 HMGB1P3-201ENST00000502802 616 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 AC007599.1-201ENST00000568688 1174 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 MIR5685-201ENST00000579080 79 ntBASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP2Q9UDT6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 RNU1-89P-201ENST00000384592 164 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 SNORA48.7-201ENST00000391302 135 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC009965.2-201ENST00000425328 970 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AF228730.2-201ENST00000438784 848 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AL356535.1-201ENST00000440335 398 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 OR9M1P-201ENST00000459641 921 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AP000926.1-201ENST00000479573 241 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC069499.1-201ENST00000489433 509 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC090543.1-201ENST00000492168 485 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 RNU1-45P-201ENST00000517191 141 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 IGKV2-38-201ENST00000517443 247 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 HMGB1P23-201ENST00000518743 568 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 IGHV3-32-201ENST00000519182 355 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC107982.3-201ENST00000584957 985 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC090912.3-201ENST00000609775 533 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 uc_338.32-201ENST00000615087 172 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AL354798.1-201ENST00000622505 329 ntBASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLIP2Q9UDT6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AL136964.1-201ENST00000622038 2990 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 FAM35DP-201ENST00000323387 2712 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 RNU6-666P-201ENST00000363499 107 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 RNA5SP322-201ENST00000363617 119 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 RNA5SP399-201ENST00000364003 117 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AL138785.1-201ENST00000425821 331 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 HMGB3P21-201ENST00000452483 547 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 FABP3P2-201ENST00000453169 399 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 RNU7-27P-201ENST00000459281 62 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC010683.1-201ENST00000473673 378 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 RPS3AP6-201ENST00000484430 795 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 RNU6-1308P-201ENST00000516817 103 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC023158.1-201ENST00000561632 1025 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AL451086.1-201ENST00000605596 223 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC015802.5-201ENST00000607478 399 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC128687.2-201ENST00000609657 566 ntBASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLIP2Q9UDT6 AC096656.1-201ENST00000623826 1364 ntBASIC4.65□□□□□ -1.66
CLIP2Q9UDT6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.65□□□□□ -1.66
CLIP2Q9UDT6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP2Q9UDT6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP2Q9UDT6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLIP2Q9UDT6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.65□□□□□ -1.66
CLIP2Q9UDT6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CLIP2Q9UDT6 XIAPP3-201ENST00000312918 795 ntBASIC4.65□□□□□ -1.67
CLIP2Q9UDT6 MIR554-201ENST00000384874 96 ntBASIC4.65□□□□□ -1.67
CLIP2Q9UDT6 RNA5SP498-201ENST00000411342 120 ntBASIC4.65□□□□□ -1.67
CLIP2Q9UDT6 RANP4-201ENST00000413361 655 ntBASIC4.65□□□□□ -1.67
CLIP2Q9UDT6 NPM1P24-201ENST00000428039 894 ntBASIC4.65□□□□□ -1.67
CLIP2Q9UDT6 MTCO1P54-201ENST00000430139 712 ntBASIC4.65□□□□□ -1.67
CLIP2Q9UDT6 FTH1P6-201ENST00000430768 320 ntBASIC4.65□□□□□ -1.67
CLIP2Q9UDT6 YWHAQP9-201ENST00000445891 512 ntBASIC4.65□□□□□ -1.67
CLIP2Q9UDT6 AC005229.2-201ENST00000456995 399 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms