Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CTSFQ9UBX1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AC097504.1-201ENST00000515103 2415 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 RNU6-317P-201ENST00000384031 107 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 RPL26P37-201ENST00000411983 438 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 PPIAP3-201ENST00000450588 505 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 HMGN2P7-201ENST00000456186 273 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 RPL7P48-201ENST00000461513 746 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AC092691.2-201ENST00000461787 803 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 FTH1P24-201ENST00000503502 462 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 MTND4LP31-201ENST00000514859 294 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 RNU6-751P-201ENST00000516382 101 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 HIGD1AP18-201ENST00000520730 278 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AC009268.1-201ENST00000561352 1203 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 CYP4A43P-201ENST00000568156 121 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 MIR1254-2-201ENST00000579553 63 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AC012417.1-201ENST00000582307 1039 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AL031666.3-201ENST00000609320 1006 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AP005264.7-201ENST00000625003 745 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 AC138649.5-201ENST00000637456 137 ntBASIC3.8□□□□□ -1.8
CTSFQ9UBX1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.8□□□□□ -1.8
CTSFQ9UBX1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 ZNF33CP-201ENST00000432492 2030 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 SNORD6-201ENST00000365444 73 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AC004022.2-201ENST00000413824 193 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 MTND2P15-201ENST00000418575 892 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 RPL36AP36-201ENST00000418616 301 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AJ239321.1-201ENST00000424255 564 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 RAD1P2-201ENST00000446414 663 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 HMGB3P22-202ENST00000451823 572 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 ANP32BP2-201ENST00000454525 545 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 RPL9P32-201ENST00000464118 620 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 TMED11P-201ENST00000479478 690 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 OR52A4P-203ENST00000498233 1014 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 PTP4A1P6-201ENST00000531034 478 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 AGGF1P8-201ENST00000562979 1000 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 HMGB1P51-201ENST00000605166 638 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 RNA5SP108-201ENST00000605921 117 ntBASIC3.79□□□□□ -1.8
CTSFQ9UBX1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTSFQ9UBX1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.78□□□□□ -1.8
CTSFQ9UBX1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.78□□□□□ -1.8
CTSFQ9UBX1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTSFQ9UBX1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
CTSFQ9UBX1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.78□□□□□ -1.8
CTSFQ9UBX1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTSFQ9UBX1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTSFQ9UBX1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CTSFQ9UBX1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CTSFQ9UBX1 MIR423-201ENST00000362201 94 ntBASIC3.78□□□□□ -1.8
CTSFQ9UBX1 RNA5SP322-201ENST00000363617 119 ntBASIC3.78□□□□□ -1.8
CTSFQ9UBX1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms