Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC018638.7-201ENST00000605836 1114 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC020634.1-201ENST00000608701 549 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 VIS1.1-201ENST00000610517 203 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AF001550.2-201ENST00000636643 217 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 OR8B1P-202ENST00000641132 1178 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL20A1Q9P218 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC025031.4-201ENST00000621248 3271 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AP000756.2-201ENST00000624168 2567 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 AL445437.1-201ENST00000623157 3087 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL20A1Q9P218 AC093849.1-201ENST00000563631 2209 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 OR5H2-201ENST00000355273 945 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL20A1Q9P218 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 RNA5SP509-201ENST00000364577 119 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 AL080315.1-201ENST00000406055 466 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 RSL24D1P6-201ENST00000426934 401 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 TXNL1P1-201ENST00000429528 554 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 AL365396.1-201ENST00000430854 671 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 GSTA7P-201ENST00000438425 448 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 MTND3P1-201ENST00000441336 220 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 TCEA1P3-201ENST00000443005 880 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 RPL23AP43-201ENST00000446445 471 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 RPL23AP24-201ENST00000458203 385 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 GAPDHP36-201ENST00000480688 918 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 BET1P1-201ENST00000482276 359 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL20A1Q9P218 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 AC109471.1-201ENST00000511631 612 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 RNU6-1225P-201ENST00000516336 65 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL20A1Q9P218 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL20A1Q9P218 AL031281.1-201ENST00000604049 488 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 AC090948.1-201ENST00000607464 549 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL20A1Q9P218 AL603755.1-201ENST00000619504 163 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 AP005019.3-201ENST00000620418 560 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL20A1Q9P218 MIR6830-201ENST00000636015 70 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.18□□□□□ -1.58
COL20A1Q9P218 AL672167.1-204ENST00000641875 3017 ntBASIC5.18□□□□□ -1.58
COL20A1Q9P218 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL20A1Q9P218 DHX9P1-201ENST00000436565 3076 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 SNORA70.2-201ENST00000364506 135 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AL161909.1-201ENST00000397390 712 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC009302.1-201ENST00000417147 390 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AL139095.3-201ENST00000419672 1203 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 GNG5P5-201ENST00000420444 220 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 RPL7P44-201ENST00000424827 742 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 YWHAZP7-201ENST00000436906 631 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 MTCYBP34-201ENST00000439552 670 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC104651.2-201ENST00000447549 528 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 RPL7P59-201ENST00000447700 943 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AL133217.1-201ENST00000450980 425 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC006511.1-201ENST00000470614 315 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC104689.1-201ENST00000473356 768 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC079395.1-201ENST00000510981 262 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 RPL7L1P13-201ENST00000511702 739 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms