Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL138785.1-201ENST00000425821 331 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 RPS26P40-201ENST00000435209 294 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC009263.1-201ENST00000441193 1239 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AL512326.1-201ENST00000443050 721 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 VN1R25P-201ENST00000443385 738 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 FABP3P2-201ENST00000453169 399 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 OFD1P3Y-201ENST00000453312 783 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 VN1R40P-201ENST00000455196 941 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 RN7SL93P-201ENST00000463035 293 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 RPS29P19-201ENST00000479709 171 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 RPL7P16-201ENST00000479738 738 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC106872.2-201ENST00000494303 480 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 MTND2P32-201ENST00000521584 1038 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 OR5AK3P-201ENST00000527486 1297 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 SS18L2P2-201ENST00000583960 235 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 VN1R79P-201ENST00000593540 513 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC090525.3-201ENST00000605601 189 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AP002802.2-201ENST00000605877 235 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AL157392.4-201ENST00000609756 345 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC016769.4-201ENST00000616893 535 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 LINC00561-201ENST00000565815 2738 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 MTCO1P18-201ENST00000455518 1419 ntBASIC4.01□□□□□ -1.77
NDE1Q9NXR1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NDE1Q9NXR1 RPS4XP5-202ENST00000449995 1334 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC008725.1-201ENST00000605123 2263 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4□□□□□ -1.77
NDE1Q9NXR1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
NDE1Q9NXR1 RNU6-185P-201ENST00000384421 107 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4□□□□□ -1.77
NDE1Q9NXR1 HMGN2P8-201ENST00000391458 268 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 MIR298-201ENST00000401212 88 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
NDE1Q9NXR1 RN7SKP213-201ENST00000410746 298 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 VN1R51P-201ENST00000411675 945 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 LINC01881-201ENST00000416103 412 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4□□□□□ -1.77
NDE1Q9NXR1 PTMAP6-201ENST00000439110 327 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4□□□□□ -1.77
NDE1Q9NXR1 RPL34P26-201ENST00000445636 354 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4□□□□□ -1.77
NDE1Q9NXR1 RPL7P31-201ENST00000450192 724 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 MTCO3P20-201ENST00000454926 688 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 DHFRP3-201ENST00000455595 559 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AC010307.1-201ENST00000467206 836 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 RPS4XP6-201ENST00000477670 797 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC011005.3-201ENST00000491624 395 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC092045.1-201ENST00000495716 1231 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AC020593.1-201ENST00000507399 299 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 IGKV1-32-201ENST00000519290 311 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC034205.1-201ENST00000520621 638 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 NPM1P35-201ENST00000533043 868 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AC008083.2-201ENST00000546707 476 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4□□□□□ -1.77
NDE1Q9NXR1 EIF1P6-201ENST00000600054 334 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC093673.2-201ENST00000609674 331 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC011472.4-201ENST00000615848 491 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC073569.3-201ENST00000619055 682 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4□□□□□ -1.77
NDE1Q9NXR1 AC244205.2-202ENST00000635781 342 ntBASIC4□□□□□ -1.77
NDE1Q9NXR1 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4□□□□□ -1.77
NDE1Q9NXR1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NDE1Q9NXR1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NDE1Q9NXR1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NDE1Q9NXR1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NDE1Q9NXR1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.99□□□□□ -1.77
NDE1Q9NXR1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms